Pandoraea norimbergensis: AT302_02020
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Entry
AT302_02020 CDS
T04226
Name
(GenBank) multidrug efflux RND transporter permease
KO
K18095
multidrug efflux pump
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr01501
beta-Lactam resistance
pnr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT302_02020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AT302_02020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnr02000
]
AT302_02020
01504 Antimicrobial resistance genes [BR:
pnr01504
]
AT302_02020
Transporters [BR:
pnr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AT302_02020
Antimicrobial resistance genes [BR:
pnr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AT302_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF639
Motif
Other DBs
NCBI-ProteinID:
ALS58737
LinkDB
All DBs
Position
complement(4819869..4823015)
Genome browser
AA seq
1048 aa
AA seq
DB search
MARFFIDRPVFAWVIALIITLVGLLSIRSLPVAQYPDIAPPVVSIWSSYPGASAKVVEDS
VTAVIERQMNGAPGLMYMSASSGNGESSISLSFRQGTSLDLAAVEVQNRLKTIESRLPEV
VRRYGVKVERAADNVQMVVTLSSSNPSVDEFDLGEIAAAQVMNQLKRVPGVGQVQFWGTE
KAIRIWPDPSKLVALDLTASDIVSRVRAYNARVTIGDLGAGATPTAAPINANIVSDSALS
TPEEFANIPLRVRADGSAIRLGDVARVELGASDYNYSSRVDGLPATAMGIKLAAGSNAIE
VMKAVRAVMDEQASLFPAGVSYQIPYETASFVKVSIQKVFKTLLEAVVLVFLVMYLFMQN
LRATLIPTLVVPVALLGTCGVLLGLGYSINTLTMFGMVLAIGILVDDAIVVVENTERIMV
EEGLPPYAATVKAMRQISGAIVGITVVLVTVFVPMAFFSGAVGNIYRQFAVTLAVSITFS
AFLALSLTPALCATLLRPISADHHEKRGFFGWFNRTFALGTERYTRTVSNTLRRPWRAIV
VYAVVLIAVPLAFMRLPSAFIPEEDTGSFMVMASEPQGATLPEAMTALTRIESYLMKDEP
VKHVFVLGGWNEFGAGPGGGMLFVTLKDWHERTSKHDGVNAIVDRVNAKFGGQPDRMVLA
MNSPALPELGSSNGFSLRLQDRAGVGNETLIAARDQLLKRAVDDPVLKNVIFAGQGDVPQ
IDVTLDRRKMEALKVSMDEVNTTLATMFGSDYVGDFMLGAENRRVIVQADGRQRVSPENV
GNLRVRNASGEMVPLSSFVSLKWKLGAPQFKRYNGYPSFTLQGESAPGKSSGEAMARMEQ
LMADMPKGIGYEWSGQSREERISGAQAPMLFALSILVVFLALAALYESWAIPASVIMVVP
LGVIGALSAVSLLGMPNDIYFKVGLIATIGLSAKNAILIVEVANDLVKHGMSWIDAAVEA
ARLRLRPIVMTSLAFGFGVVPLAIATGPASGAQRAIGVAVLGGIVTATVLAIFLVPLFFL
WVGRFVRRPNPNQADAAVDVKPAAEGNV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttctttatcgatcgcccggtattcgcttgggtgatcgcgttaatcattacg
ctggtcggtctgttgtcgatccggtcgctgccggtcgcgcagtaccccgacatcgcaccg
cctgtcgtcagcatctggagcagctatccgggcgcgtcggccaaagtggtcgaagactcg
gtgactgccgtgatcgagcgccagatgaatggcgcgccgggactgatgtacatgtcggcc
tcaagcggcaacggcgaatcgtcgatcagcctgtcgtttcgtcagggcaccagtctcgat
ctggccgccgtcgaggtgcagaaccggctgaagaccatcgaatcgcgtctgcccgaagtc
gtgcgtcgctacggcgtgaaagtggagcgcgcggccgacaacgtgcagatggtggtcacg
ctatcgtcgagcaatccgtcggtcgatgagttcgatctcggtgagatcgcggcagcacag
gtcatgaaccagctcaagcgcgtgcccggtgtcgggcaggtgcagttctggggcacggag
aaggccattcgtatctggcccgatccgtccaagctggtggcgctcgatctcacggcctcc
gacatcgtctcgcgagtgcgcgcttacaacgcgcgtgtgaccatcggcgatctcggtgcc
ggggcaacgcccacggcagcccccatcaacgccaacatcgtctccgacagcgcgctgtcg
acgccggaagagttcgccaatattccgttgcgcgtacgcgccgacggttcggcgatccgg
ctgggcgatgtcgcgcgcgtggagctgggcgcgtcggattacaactactcgtcgcgcgtc
gacggtctgccggccacggccatgggcatcaagctcgccgccgggtcgaatgccatcgaa
gtgatgaaggccgtgcgtgccgtcatggacgagcaggcgagcttgttcccggccggggtg
tcgtatcagatcccgtacgaaaccgcgtcgttcgtgaaggtgtcgatccagaaggtcttc
aagaccttgctcgaagccgtggtgctcgtgttcctcgtgatgtacctgttcatgcagaat
ctgcgggccacgctgatccctacgctcgtcgtgccggtcgcgttgcttggcacctgcggc
gtgctgctggggctgggttactcgatcaacacgctcacgatgttcggcatggtgctggcc
atcggtattctggtcgatgacgccatcgtcgtggtcgagaacaccgaacggatcatggtc
gaggaagggctgccgccctatgcggcgacggtcaaagccatgcgccagattagcggcgcc
atcgtggggattacggtcgtgctggtgacggtgttcgtgccgatggcgttcttctcgggc
gcagtgggcaacatctatcgccagttcgcggtaacgctcgcggtgtcgatcaccttctcg
gcgttcctcgccctctcgttgacgcccgcgttgtgcgccacgttgttgcgcccgatctcg
gccgatcaccacgagaaacggggtttcttcggctggttcaaccgcacgtttgcgttgggc
accgagcgctacacgcgcacggtgagcaatacgctgcgtcgtccgtggcgcgccatcgtg
gtctacgcggtggtgctgatcgcggtgccgctggcgttcatgcgcttgccgtcggccttc
atcccggaggaagacaccggcagcttcatggtgatggcctccgagccgcaaggcgcgacg
ctgcccgaagcgatgacggccctcacgcgtatcgagagctacctgatgaaggatgagccg
gtcaaacacgtcttcgtgctgggtggctggaacgagttcggcgccgggccgggcggcggc
atgttgttcgtgacgctgaaagactggcacgagcgcacatcgaagcacgacggcgtgaat
gccatcgtagatcgcgtgaatgcgaaattcggcggtcagccggaccgcatggtgctggcg
atgaacagcccggcgctgccggagctgggttcgtcgaacggcttcagtctgcgcttgcag
gaccgtgccggtgtgggcaacgaaacgctcatcgccgcgcgtgaccaattgctcaagcgg
gcggtcgatgatccggtgctcaagaacgtgatctttgccggtcagggcgatgtgccccag
atcgacgtcacgctcgaccgtcgcaagatggaagcgctcaaagtgagcatggatgaggtg
aacaccacgctcgcgacgatgttcggttcggactacgtgggcgacttcatgctcggcgcg
gagaaccgccgtgtgatcgtgcaggccgatggccgtcagcgcgtgtcgccggagaacgtc
ggcaatctgcgcgtgcgcaatgccagcggcgagatggtgccgctgtcgtccttcgtgtcg
ctcaagtggaagcttggtgcgccgcagttcaagcgctacaacggctatccgtcgttcacg
ctgcaaggggaatcggcgccgggcaagagcagtggcgaagccatggcgcgcatggagcaa
ctgatggccgacatgccgaagggcatcggttacgagtggagcggtcagtcgcgcgaggag
cgcatttccggcgcgcaggcaccgatgctgttcgcgttgtcgattctggtggtgtttctc
gcactcgccgcgctctatgaaagctgggccattccggcgtccgtcatcatggtggtgccg
ctgggtgtgatcggtgccttgagtgctgtgagcttgctgggcatgccgaacgacatttac
ttcaaggtcggtttgattgcgaccatcggtctgtcggcgaagaacgcgattctgatcgtg
gaagtggcaaacgatctggtcaagcacggcatgagctggatcgatgcggcggtggaagct
gcgcgtctgcgcctgcgcccgatcgtgatgacgtcgctcgccttcggtttcggcgtggtg
ccgctggccatcgcgacggggcctgcttccggtgcgcagcgcgcgatcggtgtggcggtg
ctgggcgggatcgtaacggccacggtgctggcgatcttcctcgtgccgttgtttttcctg
tgggtcgggcgcttcgtgcgccggccgaatccgaatcaggcggacgctgcggttgacgtg
aagccggccgccgaggggaatgtatga
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