KEGG   Erythrobacter neustonensis: A9D12_13070
Entry
A9D12_13070       CDS       T04416                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
pns  Erythrobacter neustonensis
Pathway
pns03030  DNA replication
pns03410  Base excision repair
pns03420  Nucleotide excision repair
pns03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A9D12_13070
   03410 Base excision repair
    A9D12_13070
   03420 Nucleotide excision repair
    A9D12_13070
   03430 Mismatch repair
    A9D12_13070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pns03032]
    A9D12_13070
   03400 DNA repair and recombination proteins [BR:pns03400]
    A9D12_13070
Enzymes [BR:pns01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     A9D12_13070
DNA replication proteins [BR:pns03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A9D12_13070
DNA repair and recombination proteins [BR:pns03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     A9D12_13070
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A9D12_13070
   MMR (mismatch excision repair)
    DNA ligase
     A9D12_13070
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A9D12_13070
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT PTCB-BRCT Nlig-Ia
Other DBs
NCBI-ProteinID: ANK13724
UniProt: A0A192D7H7
LinkDB
Position
complement(2812435..2814507)
AA seq 690 aa
MTGELSEAQAANELMRLAREIARHDRLYHAEDSPEVTDAEYDALVRRNAELEAAFPHLVR
ADSPSRKVGHAIAASPLGKVTHEVRMMSLDNAFSAEEVAEWLARMRRFLSLPADAAMAVT
AEDKIDGLSCSLRYENGTLVRAATRGDGQVGEDVTANVAHIPDIPQQLPAGVPQVFEVRG
EVYMEKAAFAALNAAQAEAGGKLFANPRNAAAGSLRQKDAGVTARRPLRFWAHGWGAASS
VPGSTQSEVVESLREWGFPVSPLFTTITGGAEALVAHFAAIGAGRAALPYDIDGVVYKLD
RLDWQERLGFVAKAPRWALAHKFPAERAETTVQGIDIQVGRTGKLTPVGRLAPVLVGGVT
VTNVTLHNRDEIARLGLRVGDRVVIQRAGDVIPQVVENLTREEPRAPFVFPDHCPECGSE
AVAEEGEVDVRCTGGLICPAQRTQRLEHFVSRKALDIEGLGEKTIAQFFALGWLESPADI
YRLRRRRSDILGLEGWQEKSVDNLLAAIEAKRAPDAARLLFALGIRHVGEVTARDLMKRF
HELPILRTLAEQARAGESDAAAELLAIDGIGPSVVEALGDFFHEPHNVAVWEDLLNEVTP
PRYEVKTVASRVSGKTVVFTGKLETMSRDEAKAQAERLGAKAAGSVSAKTDLLVAGPGAG
SKMKKAAELGIEVVDEAGWAAIVAEAAGGG
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgaccggcgaactctccgaagcacaggccgccaacgagctgatgcggctcgcgcgcgag
atagcgcggcacgaccggctgtatcacgccgaggacagccccgaggttaccgacgccgaa
tacgacgcgctggtgcggcgcaatgcggagctggaagcggccttcccgcacctcgtccgc
gccgacagcccgtcgcgcaaggtcggccacgccatcgccgcctcgccgctcggcaaggtg
acgcacgaagtgcggatgatgagcctcgacaatgccttttcggccgaagaggtcgccgaa
tggctcgcgcggatgcggcggtttctgagcctgccggctgacgccgcgatggcggtcacc
gccgaggacaagatcgacgggttgtcgtgcagcttgcgttacgagaacggcacgctggtc
cgcgccgccacccgcggggacgggcaggtgggcgaggacgtgaccgccaatgtcgcgcat
atccccgacatcccgcagcagcttcccgccggcgtgccgcaagtgttcgaggtgcgcggc
gaggtctatatggaaaaggccgcctttgccgcgctcaatgccgcgcaggccgaggccggg
ggcaagttgttcgccaatccgcgcaacgcggcggcgggcagcctgcggcagaaggacgcg
ggcgttaccgccaggcgccccttgcggttctgggcgcatggctggggcgcggcaagcagc
gtgccgggcagcacgcagagcgaggtggtcgagagcttgcgcgaatggggctttcccgtc
tcgcccctgttcaccacgatcaccggcggggccgaggcactggtcgcgcattttgccgcg
atcggtgcgggccgcgcggccttgccctatgatatcgacggggtggtctacaagctcgac
cgattggactggcaggagcggctgggtttcgttgccaaggccccgcgctgggcgctggcg
cacaagttcccggccgagcgtgccgaaaccaccgtgcaggggatcgacattcaggtgggg
cgcacgggcaagctgaccccggtgggccgccttgccccggtgctggtcggcggggtgacc
gtcaccaacgtcacgctccacaaccgcgacgagatcgcgcggctgggccttcgcgtcggc
gaccgcgtggtgatccagcgcgcgggcgacgtgatcccgcaggtcgtcgagaacctcacc
cgcgaagaaccgcgcgcgcccttcgtcttccccgatcattgccccgaatgcggcagcgag
gcggtggccgaggagggcgaggtcgatgtgcgctgcaccggcgggctgatctgccccgcg
cagcgcacccagcgactggagcacttcgtcagccgcaaggcattggatatcgaaggcctg
ggcgagaagaccatcgcccagttctttgccttgggctggcttgaaagccccgccgatatc
taccgcctgcgcaggcggcgcagcgatatcctcggccttgaaggctggcaggaaaagtcg
gtcgacaatctgctcgccgcaatcgaggccaagcgcgcgcccgatgccgcgcggctgctc
ttcgcactcggcataaggcacgtgggcgaagtcaccgcgcgcgacctgatgaagcggttc
catgaactgccgatcttgcgcacccttgccgagcaggcgcgcgccggcgaaagtgatgcc
gcagccgaattgctcgcgatcgacgggatcggcccatcggtggtcgaggcgctgggcgat
ttcttccacgaaccccacaacgtcgcagtctgggaagacctgctaaacgaagtcaccccg
ccgcgttacgaggtgaaaaccgtcgccagccgcgtttcgggcaagaccgtggtgttcacc
ggcaagctcgaaacgatgagccgcgatgaagcgaaggcgcaggctgaacggctgggcgcg
aaagccgcaggctctgtcagcgcgaaaaccgatctgctggtggcagggccgggggcggga
tcgaagatgaagaaggccgccgaactcggcatcgaggtggtcgacgaggcaggctgggcc
gcgatcgttgccgaggcggcgggcggcggctga

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