Pseudomonas nitroreducens: G5B91_29980 Help Entry G5B91_29980       CDS       T08828                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pnt  Pseudomonas nitroreducens Pathway pnt03030   DNA replication pnt03410   Base excision repair pnt03420   Nucleotide excision repair pnt03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pnt00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     G5B91_29980 (ligB)    03410 Base excision repair     G5B91_29980 (ligB)    03420 Nucleotide excision repair     G5B91_29980 (ligB)    03430 Mismatch repair     G5B91_29980 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pnt03032]     G5B91_29980 (ligB)    03400 DNA repair and recombination proteins [BR:pnt03400]     G5B91_29980 (ligB) Enzymes [BR:pnt01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      G5B91_29980 (ligB) DNA replication proteins [BR:pnt03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      G5B91_29980 (ligB) DNA repair and recombination proteins [BR:pnt03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      G5B91_29980 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      G5B91_29980 (ligB)    MMR (mismatch excision repair)     DNA ligase      G5B91_29980 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       G5B91_29980 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_5 RNA_ligase HHH_2 DUF3701 Motif Other DBs NCBI-ProteinID:  QIE90252 UniProt:  A0A6G6J4R2 LinkDB All DBs Position 6294912..6296579 Genome browser AA seq 555 aa AA seqDB search MLRLVITLLLCLPLTVRACPDWPSEQVPRQIEALRGQLTQWDDAYHRDGKSPVADELYDQ ARERLAQWRDCFPQVRVAPESPLASSAGTIRHPFPHTGLDKLPDASAVRSWLANRSDLWA QPKVDGVAVTLIYRDGRFIQAISRGDGSAGQDWTSNAQRIDAIPRQLPGEPGDLVLQGEL YWRLPQHVQALQGGSGARGKVAGLMARKDLGDQGTQIGLFVWELPEGPVKMPDRLARLRQ LGFDDSADLTVPVAGQSEIESWRERWYRQPLPFASDGIVIRQGRRPPGKAWSAQAPGWAV AWKYPHQQALAEVRRVAFKVGRSGRVTPVLHLAPVELDGRTIQRVGVGSLKRWRSLDIRP GDQVAIALAGLTIPRLDGVVWRSPNRPQIAAPEDGQFNALSCWRPIEGCEEQFLARLEWL SGKSGLGLAGVGPGTWSKLHEAGLLTGILAWMTLTPEQLSQVPGLGERSAASLHQQFQLA RQRSFATWLRALGAPSPNAHPAGDDWPALAARDAVQWQMQPGIGKVRAAQLEAFFKAPAV VQLREQLHDLGVAGF NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgctccgcctcgtcatcaccttgctgctttgccttcctcttaccgttcgtgcctgcccc gactggccgtccgagcaggtgcctcgacagatcgaggcactccgcgggcagctgacgcag tgggatgacgcctaccaccgggacggaaagtcccccgtggccgatgagctttacgaccag gcacgcgaacgactggcgcagtggcgggactgcttccctcaagtccgtgttgcccccgag tcaccgctggccagcagcgcggggacgattcgccaccccttcccccacaccggcctcgac aagcttcccgatgcctcggccgtgcgcagttggctggccaaccgctccgatctctgggcg caacccaaggtcgacggcgtagcggtcacgctgatctaccgcgacggtcgcttcatccag gcaatcagccgcggcgacggcagcgccgggcaggactggacctccaacgcgcaacgaatc gatgctatccccaggcagttacccggcgaaccaggcgatctggtgctgcaaggcgagctg tactggcgactgccacagcatgtgcaagcgttgcagggcggttcgggtgcccgcggcaag gtcgccggcctgatggcccgcaaggatttgggcgaccaaggcacacagatcggtctgttc gtctgggagctgccggagggtccggtgaaaatgccggatcgcttggcacgactgcgccag ctgggattcgatgacagcgccgacctgaccgtaccggtggctgggcaatctgaaatcgag tcctggcgcgaacgctggtatcgccagccgctgcccttcgccagcgatggcattgtcatc cgccagggccgccggccaccgggcaaggcctggagtgcacaggcgccgggctgggcggtg gcgtggaagtatccacatcaacaggcactggcggaggttcgtcgcgtggcgttcaaggtc ggccgcagtggccgggtgacacctgtgctgcatctggccccggtagagctggacggacga accatccagcgcgtcggcgtcggctcgctcaagcgctggcgcagcctggacatccgccct ggcgaccaggtcgccatcgccctcgccggactgaccattcctcgcctggacggcgtggtc tggcgctcgccgaatcgcccccaaatagccgcgccagaagacggccagttcaacgccctc tcctgctggcggcccatcgagggctgcgaggaacagttcctcgcccgcctggagtggctc agcggaaagagcgggctggggctagccggtgtcggaccgggcacctggagcaagctgcac gaagccgggctgctgacgggaatactcgcctggatgacgctgacgccagagcaactgagc caggttcccggactcggtgagcgaagtgcagcgagtctgcaccagcagttccagctcgct cgccagcgatcgttcgctacctggctgcgtgcactgggtgcaccgtcccccaacgcccat cccgcgggagacgactggcccgcgctggccgcccgcgacgcagtgcagtggcagatgcaa ccaggcataggcaaggtgcgcgcggcacaactggaagccttcttcaaagcgccggcagtc gtgcaattgcgcgagcagttgcacgacctcggcgttgccggtttctga

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