Paenarthrobacter nicotinovorans: JMY29_08105
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Entry
JMY29_08105 CDS
T08055
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00300
Lysine biosynthesis
pnv00550
Peptidoglycan biosynthesis
pnv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JMY29_08105
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JMY29_08105
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnv01011
]
JMY29_08105
Enzymes [BR:
pnv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JMY29_08105
Peptidoglycan biosynthesis and degradation proteins [BR:
pnv01011
]
Precursor biosynthesis
Amino acid ligase
JMY29_08105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
EF-1_beta_acid
Motif
Other DBs
NCBI-ProteinID:
UKF05523
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Position
1737453..1739096
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AA seq
547 aa
AA seq
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MSEHKEAASNTATPDAGRSAFRPASVAAVPLAVIAGALGVTAPDGSQDLGVTGITLNSRA
VEPGDLYMALPGATRHGADFVPQAVEAGAVAVVTDDAGARQLALATEQPVPVLIIAEPRA
AVGPLSALIYRSQPEDAAFPSLFGVTGTNGKTTTTYFINSLLRALGKQPGLIGTIEIVAG
GEPIPSLLTTPESPDVHALLALMRERGLDAASMEVSSHAISYRRVDSVMFDVAGFTNLTQ
DHLDLHGSMEEYFNTKAELFTAGRARQAVVTVDDEWGRKLAALADIPVTTLSAASSSGAP
DADWHVASINPRGLGSEFELHHTDGRTLRVHTGLPGDFNVANAALATVMVLASGVDESEL
QDALDAHDPFTVAVPGRMQLVSTEPAAVVDFAHNPDALARALMAVRSPEEESRVIVVFGA
TGQRDQGKRPTMGAIAARLADVVIISDDDPHDEDAAAIRAEVLAGAFAAREGENLGSEII
ESYPRDAAIRLAVDLATAKDTILIAGRGHEVWQEVQGVNLALDDRVELRAALTSKGFSVS
SDQRIES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagcacaaagaggcagcttccaataccgcgacgccggatgccggacggtcagct
ttccgtcccgcatccgttgctgcggtgcccctggcggtcatagcgggagcgctgggagta
acggcccctgacggcagccaggaccttggcgtcaccggcatcacgctcaattcccgtgcc
gttgaaccgggcgatctctacatggccttgccgggcgccacgcgccatggtgccgatttc
gtaccccaagccgtggaggccggtgccgtcgcagtggttacggacgacgccggtgcacgc
cagcttgcgctggcaaccgagcagcccgtccctgtcctcatcattgcggagccgcgggcc
gccgtcgggcctttgtccgcgctgatctatcgcagccaaccggaggatgcggccttcccg
tcgcttttcggcgtcacggggaccaatggcaagaccaccaccacttacttcatcaactcg
ctgctgcgtgccttgggcaagcagccgggcctgatcgggaccatcgagatagtggccggc
ggagaacccatcccgagcctcctgaccactccggagtccccggatgtccacgcactgctc
gcattgatgcgggagcggggcctggacgcggcgtccatggaggtttcatcgcacgcgatc
tcctaccgccgggtggactctgtcatgttcgacgtcgcaggattcaccaacctcacccag
gaccatctggacctccacggcagcatggaggagtacttcaacaccaaggccgaactcttc
accgccggacgcgcacgccaggctgttgtcacggtcgacgacgaatggggccgcaagctt
gccgccctggcggacattccggtcaccacgctttcagcggcttcttccagtggcgccccg
gacgctgactggcacgtcgcgtccatcaacccgcgcgggttgggttcggaattcgaactg
caccacacggacggccggaccttgcgggtccacaccggcttgccgggcgacttcaacgtg
gcaaacgcggcgttggctaccgtcatggtcctggcgtccggggtagatgaatccgagctc
caggacgccttggatgcccacgatccttttacggttgctgttcccgggcgcatgcagctc
gtctccacggagcccgccgccgttgttgattttgcccacaatcccgatgccctggcccgt
gcactgatggcggtccggtcaccggaggaagagtcacgcgtcatcgtggtttttggcgcc
acaggacaacgtgaccaaggcaaaaggcctaccatgggcgcaatcgcggcccgtctggcc
gacgtcgtgattatcagcgatgacgacccccacgatgaggatgccgccgccatccgcgct
gaggtgctggcgggcgcctttgctgcgcgggagggagagaacctgggcagcgagatcatc
gagtcctacccgagggatgctgccatccgcctcgccgttgacctggcgacggcgaaggac
accatcctcatcgcaggacgcggccacgaggtgtggcaggaagtacaaggcgtaaacctc
gccctggacgacagggtcgagttgcgggccgccttgacatccaagggattcagcgtttca
tcggaccagcggatagagtcctaa
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