Pseudodesulfovibrio nedwellii: SYK_08380
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Entry
SYK_08380 CDS
T09024
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00540
Lipopolysaccharide biosynthesis
pnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SYK_08380 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pnw01005
]
SYK_08380 (lpxC)
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SYK_08380 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pnw01005
]
Lipid A
SYK_08380 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BDQ36478
LinkDB
All DBs
Position
complement(879257..880177)
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AA seq
306 aa
AA seq
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MSQTTIHKSVRCTGIGLHSGKQVELVLRPAAEDTGILFALRNGSGSTFLTPAPSLVVETS
LATVLGDGRETVATVEHLMAAINGMGIDNIQIEVSGRELPIMDGSAASFVYLLKQAGVRT
LSKARKVMAIKKNIEFEQDGKYIKARPHDGFRIDYIIDFAHPLIGRQQMELEITPDTFAK
EVAKARTFGFLKEVDYLHANGLALGGSLDNAVVLDEYGILNAEGLRFKDEFVRHKVLDFV
GDMAIFGAPIRGHFEVFASGHALNNSFLRHLDENRELYLEEKVLTQPRVAEEVLGGEILE
PATAVA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagactactatacataaatcggtccgttgtacgggcatcggacttcacagcggt
aagcaggtggagttggtgttgcgtcctgccgccgaggatactggaattctttttgcgcta
cgcaacggttccgggtctacattcctgacccccgcgccgtctttggttgttgagaccagt
ctggcgaccgtgctgggtgatggtcgcgaaaccgtggctactgtcgagcatctcatggcc
gcaattaatggtatgggtatcgacaatattcaaattgaagtttctggccgcgaattgcct
atcatggatggcagcgcggcttcttttgtctatttacttaagcaggcgggcgttcgcaca
ttgagcaaggcccgtaaggtcatggcgatcaagaaaaatatcgagtttgagcaggatggt
aaatacatcaaggctcgtcctcatgatggttttcgtatcgactacattatcgatttcgct
catccgcttatcggccgtcaacagatggaacttgaaattactcccgatactttcgctaag
gaagttgccaaggctcgcacttttggtttcttgaaagaggtcgattatctgcacgcaaat
ggtttggcccttgggggctcactcgacaacgccgtggtgcttgatgaatatggcattctg
aatgcggaagggcttcgtttcaaagatgaattcgttcgtcataaggtgctggattttgtt
ggtgacatggctatttttggtgcaccaattcgcggccattttgaagtgttcgcttctggt
cacgctttgaacaattctttcctgcgtcacttggacgaaaacagggaactgtatctggaa
gagaaggttttgactcagcctcgggttgccgaggaagtgcttggtggcgaaatcttggag
ccagctacagccgttgcctag
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