Pseudodesulfovibrio nedwellii: SYK_13120
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Entry
SYK_13120 CDS
T09024
Name
(GenBank) MexE family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw01501
beta-Lactam resistance
pnw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SYK_13120
01503 Cationic antimicrobial peptide (CAMP) resistance
SYK_13120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnw03036
]
SYK_13120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_13120
01504 Antimicrobial resistance genes [BR:
pnw01504
]
SYK_13120
Chromosome and associated proteins [BR:
pnw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SYK_13120
Transporters [BR:
pnw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SYK_13120
Antimicrobial resistance genes [BR:
pnw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SYK_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
OEP
SHOCT
DUF1411
DUF5666
Motif
Other DBs
NCBI-ProteinID:
BDQ36952
LinkDB
All DBs
Position
complement(1405665..1406864)
Genome browser
AA seq
399 aa
AA seq
DB search
MAKKGLRGALLLSLVVLVLMAAGCGGEDKAAQAPQGPVPMKVVKAETRTMPQWGEFVGQI
SAVETVEVRARVAGFLIKRNFEEGGSVKKGDLLFVIDPKPFEEDLKQAQSGLQYNQALYK
KAKKDFERFKKLYDEGVVSRDEYESYQTQVATYQAQIGDNQAKVENAKIQLGYTKIYAST
DGLIGRVKVDVGNLVGQGENTLLATISTQDPVYVSFSISENDYVRATRSRMEKDTDRQIR
LLLSDGNEYGHDGQVSMVDPTIDPQTGTLGIRVVFPNPENMLRPGQYAKVRVLITNIDDA
VVVPARAVMDVQGMKSLYVVGADGKVKSQPVKIGFEVDNLTVVKEGLKVDDMVIVDGIRR
VRPGMDIKPIVVPMTDDGSQPAPAATPAAEAQDTEKKDS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaggtctgcgtggagctctcctcctgtctttggttgtacttgttttgatg
gctgccggttgtggcggtgaagataaagcggctcaggctcctcagggtcccgtacctatg
aaggtcgtcaaggccgaaactcgaacgatgccgcaatggggtgagttcgtagggcagatc
agtgctgtcgaaaccgttgaggttcgggcacgcgtggccggatttttgatcaagcggaat
ttcgaggaaggtgggagtgtcaagaagggcgacctgttgttcgtcatcgatcccaagcct
tttgaagaggatttgaagcaggcccagtcaggtctgcaatacaatcaggctttgtataaa
aaagcgaagaaagactttgagcgattcaagaagctctatgatgagggcgtggtcagccgc
gatgagtatgaaagctatcagacgcaggttgcgacctatcaggcgcagattggcgacaat
caggccaaggttgaaaatgcgaagattcagcttggatataccaaaatttatgcttccact
gacggccttatcggtcgtgtgaaagtggacgttggtaaccttgttggtcagggtgaaaat
acgttgctcgccactatttctacgcaggacccggtctatgtcagttttagcattagtgaa
aatgactatgtgcgggctacccgtagtcgtatggaaaaggatacagaccgtcagattcgg
ttactcctttccgatggcaacgaatatggccacgacggccaggtcagcatggttgatccg
acgattgaccctcagaccggtacgctggggattcgtgtcgttttccccaatccagagaat
atgctcaggcctggtcagtacgctaaggttagagtgcttattacgaatattgatgatgcc
gtggtcgtcccggcccgcgcggtcatggatgtgcaaggaatgaagtccctctacgtggtt
ggtgcagacggcaaggtcaagagccagcctgttaagatcggttttgaagtagacaatctg
accgttgttaaagaaggattaaaagtcgacgacatggttattgttgacggtattcgcaga
gtgcgtccgggtatggacatcaagccaatcgtcgttcccatgactgatgacggctcccag
cctgcacccgctgctacacccgctgccgaagctcaggatactgaaaagaaggacagctag
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