Pseudodesulfovibrio nedwellii: SYK_15590
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Entry
SYK_15590 CDS
T09024
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K05299
formate dehydrogenase (NADP+) alpha subunit [EC:
1.17.1.10
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00680
Methane metabolism
pnw00720
Other carbon fixation pathways
pnw01100
Metabolic pathways
pnw01120
Microbial metabolism in diverse environments
pnw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
SYK_15590
00680 Methane metabolism
SYK_15590
Enzymes [BR:
pnw01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
SYK_15590
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer4
Fer4_21
Fer4_7
Fer4_6
Fer4_2
Fer4_10
Fer4_9
Fer2_4
Fer4_4
Fer4_15
Fer4_3
Fer4_8
Fer4_13
Fer4_16
Fer4_Nqo3
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
BDQ37199
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Position
complement(1695420..1698182)
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AA seq
920 aa
AA seq
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MRHVIINDKKIEFRENQTLLDVASQAGISIPTLCQSETCYCDNSCELSIAENIDTGELIS
TSTTLAVEGLNITTESPKVFEARKTKLTSIFSTGAHNCFTAKLPEGKCAPGHLEARDMEW
HDHECPAKGACVLQKMAGKHKVPVRDVPLEIETPVVDNRSPFIARDYSRCIKCGQCIATC
QDIGQSAISRHSFNGTWHPTVDMEKCTHCGQCIEACPVGALFDKKALGITKKKVKKVQTT
CPYCGTGCQLILHVKDEKIIKVTADENIAPNKGRLCVKGRFGYDFIYSKNRLTAPLIKEN
GKFREASWDEALDLVASKFMEIRDEYGPDAIAGLSCARSITEDSYNMQKLFRATIGTNNI
DHCARTUHAPSVVGLTTMLGSGAMSNNFEDIEKASTILVIGSNMTVAHPVVATFVHNAVQ
KGAKLVVVDPRATKLTEWANMHLRLKVGSDVALINSIMNVLITENLYDKDYVEQWVDGFD
ELEETVLRYTPEEAEKVTGVPAEQVVDLARLLAESKPAMLIYTLGITEHTSGVHNVFSCA
NLQLLLGNIGIPGGGVNPLRGQNNVQGACDAGALPDSFPGYEKVHNPAARKKFQKAWNVG
NLLGYEGLRLPAMLEGLKTKKVRGFYVFGEDPATTEPDMHHVHGCLSSAEFMVCNDIFPT
KTTEYADVVLPSAAWSEDDGTFINTERRVNRVRKVSPPPGEARPNWWIFRELAKRMGDTW
ESSSAQDIWDNEMAPQCSMLNGITYDRLENESLQWPVPHSLHPGTPHLFKDTPHLFRDVK
FKQGKAHFQAVDWTPSAETPDKEYPLILSTGRRLYHYNCSSQTANAIGLNDLLSEEIVDI
APVDAKQLGFETGEMIQLTSRRGTITVRARVTDEVPKGMVWMAFHFYKNNSNWLTNSAAD
PISDTAEYKACSVRIDYPVN
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacgtcattataaacgataagaagatagaattccgagagaatcagacacttctg
gacgttgcctctcaggcaggtatcagcatcccgactttgtgccagagcgagacatgttat
tgtgacaatagttgtgaactcagcatcgctgaaaatatagatacgggagagttgatttca
acatcgaccacgcttgccgtggaagggttgaacatcacaaccgagtctcccaaagtcttt
gaggctcgaaaaactaaattgacgtctattttttctaccggggcgcacaactgttttaca
gccaagctaccggaagggaaatgcgcacccggccatcttgaagccagggacatggagtgg
cacgatcacgaatgcccggcaaaaggggcgtgtgtccttcagaaaatggcagggaagcac
aaggtgcctgttagggatgttcccttagaaattgagacgccggttgttgacaatcgctct
ccgtttattgctcgagattatagtcgttgcatcaaatgcggccaatgcatcgcaacctgc
caggacattggccagagcgctatttcccgtcattcttttaatggaacatggcatccaact
gtcgatatggaaaagtgcacccattgcggtcaatgtattgaggcgtgtcctgttggagcc
ctttttgacaagaaagcacttgggataactaaaaaaaaagtcaaaaaagtccagacgaca
tgtccatattgcgggactggctgtcagttgatccttcacgttaaggacgaaaagatcatc
aaagtcacagccgatgaaaatattgcgccaaacaaggggcgattgtgtgtgaagggacgc
tttggatacgattttatctattccaaaaatcgcctcacagcgcctcttatcaaggaaaat
gggaaattcagggaagcgtcatgggatgaggctctcgatcttgttgcttccaaatttatg
gagattcgtgacgaatacggtccagatgcaattgcaggtttgagttgcgcccgaagtatt
accgaagattcatataacatgcagaagctctttagggcgaccataggcaccaacaacatc
gatcattgcgcacgaacctgacacgctccatcggtcgtcggtctgacgacaatgcttggt
tccggtgcaatgtctaataactttgaagatatcgaaaaggcgagcacaatactcgttatc
ggctcgaacatgaccgtagcccatccagtggttgcgacgtttgttcataatgccgttcag
aaaggtgcaaaactggttgtcgttgatcctcgggcaaccaagcttacagagtgggcgaat
atgcacttgcggctgaaagtcggctctgatgtcgcgttgatcaactccataatgaatgtt
ttgatcacggaaaatctgtatgacaaggattacgtagagcagtgggttgatggttttgat
gagcttgaggaaaccgtactcaggtacactcctgaagaggccgaaaaggtcacaggagtt
cccgctgaacaagtcgttgatctcgcacgactgttggctgaatcaaaacccgcaatgctt
atatatactcttggtataacggaacatacttctggtgttcataacgtgttcagctgcgca
aatttgcaattattgcttggaaacattggtatacccggtgggggcgtaaacccattgcga
ggtcaaaacaatgttcagggcgcatgtgatgcaggtgctctgccggattctttccccggc
tatgagaaagtgcataacccggctgctcgtaagaagttccaaaaagcgtggaatgttggc
aacctcctcggctatgaggggttgcggcttcccgccatgctcgaaggtttgaaaacaaaa
aaggttcgtggattctatgttttcggtgaagatccggctacaaccgaacctgacatgcac
catgtccacggttgcctctcgtctgccgagtttatggtgtgtaacgacatctttcctacg
aaaacgaccgaatatgcggacgtagttcttccatccgctgcctggagcgaagatgacggg
acattcattaatacggaacgtcgagtcaaccgcgttcgtaaggtgtctcctccccctgga
gaggctcggcccaattggtggattttccgtgagctggcaaagcgcatgggagacacttgg
gaatcctccagtgctcaggacatctgggacaatgagatggcgccgcaatgctctatgctg
aatggaattacctatgaccgattggaaaatgaatcgttgcaatggccggttccgcattct
ttgcatcccggtacaccgcatctgttcaaggatacgccgcatttgttccgtgacgtaaaa
ttcaaacaggggaaggctcattttcaagctgttgattggacaccatctgcggagacgcct
gacaaggagtaccctttaatcttgagtacaggcagaagactctatcattacaattgcagt
tcgcaaacagccaacgcgattggacttaatgatttgctcagcgaagaaatagtcgatatc
gcgcctgttgacgccaaacagttgggctttgaaactggtgaaatgattcaactcacctca
aggcgtggcaccatcacagtccgagctcgtgtaacggatgaggtccctaagggaatggtt
tggatggcgtttcatttctataagaataattcgaattggcttactaattcagctgcagat
ccgatttcggatacggccgaatacaaagcatgctctgttagaatcgattatccagtgaat
tga
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