KEGG   Pseudodesulfovibrio nedwellii: SYK_27550
Entry
SYK_27550         CDS       T09024                                 
Symbol
ispDF
Name
(GenBank) bifunctional enzyme IspD/IspF
  KO
K12506  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw00900  Terpenoid backbone biosynthesis
pnw01100  Metabolic pathways
pnw01110  Biosynthesis of secondary metabolites
Module
pnw_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    SYK_27550 (ispDF)
Enzymes [BR:pnw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.60  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
     SYK_27550 (ispDF)
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.12  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
     SYK_27550 (ispDF)
SSDB
Motif
Pfam: YgbB IspD NTP_transf_3 NTP_transferase
Other DBs
NCBI-ProteinID: BDQ38395
UniProt: A0ABM8B445
LinkDB
Position
complement(2991969..2993297)
AA seq 442 aa
MNDDHPVRGDKTRLMTGSNLIYRAGKGAYLLPRDHFSFNGIGFRMTRPLKNIWGIILAAG
SGTRLAEAVNGERKQYLEYKSAPLFWHCARTFSRVARVKGLVFVFPPEDAPTMEKKLRQY
FKSEDLGLKWKVIPGGERRQDSVKNGLIGLPKECDGILVHDSARPFVSPRIITDLIDTLD
NGARGVIPTIPVTDTVKRVADDKVVDTLNRAELAAVQTPQGFETSILKEAHDRADAEGWE
VTDDASMVEKLAEVDVIPGETRNIKITVPEDLKRLEETKTTVPCMGWGYDVHRFGGENDR
PLTLGGVPIAGGPTIIAHSDGDVLLHALTDAILGTFGGGDIGKHFPDTDPKFKGVDSSIF
LREVLTMAEETGTRIVHADLTVITQAPRLSPHANQIAKNICRLLGLDAHQVNFKATTEEK
LGFTGAKKGIKAVASVTGLRDL
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaatgatgaccaccccgtaaggggcgacaaaacccggcttatgaccggctccaacttg
atataccgcgcgggaaaaggcgcataccttctcccgcgcgaccacttttcattcaacggc
ataggttttcgcatgacgcgtccactcaaaaatatctggggcataatccttgccgcaggc
tccggtacaagactggctgaagccgtaaacggcgaacgcaagcagtacctcgaatacaaa
tcggcaccactgttctggcattgcgcccgaacattctcacgtgtagcccgcgtcaagggg
ctagtgttcgtcttcccgcccgaagacgctccgaccatggagaaaaaactccgccaatat
ttcaaatccgaagacctcggcctgaagtggaaagtcatccccggtggcgaacgccgtcag
gattccgtcaagaacggtctgatcggtctgcccaaggaatgcgacggtattctggtccac
gactcggctcgcccgttcgtatcacctcgaatcatcactgaccttatcgacaccctcgat
aatggcgcgcgcggtgtgatccctaccataccggtgacggacacggtcaaacgcgtggct
gacgataaggttgtcgacaccctgaacagggccgaactggccgcggtccaaactccgcag
ggattcgaaacatccattctcaaagaagcccatgaccgggctgatgccgaagggtgggaa
gtaacagatgatgccagcatggttgaaaagctggctgaagtggacgtgattcccggcgag
acacgcaacatcaagatcactgttcccgaggacctaaagcgtctggaagaaacaaagacc
actgtcccatgtatgggctggggctacgatgtccaccgctttggcggtgaaaatgatcgt
ccactgacacttggtggggttcccattgccggtggcccgaccatcattgctcactcagat
ggcgatgtactcctgcatgccctgacagatgccattctgggcactttcggtggcggagac
attggcaaacatttcccggacacggacccgaaattcaagggcgtggacagctctatcttt
ctgcgagaagttctgaccatggcagaagaaaccggaacgcgtatcgtccacgcggatctg
acggttattactcaagcgccgagactttccccgcatgcgaatcaaatcgcaaaaaacatc
tgccgtctcctcggactggatgctcatcaggttaacttcaaggccaccactgaagagaaa
ctcggctttaccggcgccaaaaaaggtatcaaggccgtagcttccgttacgggtctccgg
gatttgtag

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