KEGG   Populus nigra (Lombardy poplar): 133671306
Entry
133671306         CDS       T10372                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133671306
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    133671306
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 ERCC3_RAD25_C Ig_TMEM131L_2nd
Other DBs
NCBI-GeneID: 133671306
NCBI-ProteinID: XP_061948008
LinkDB
Position
13:818054..823116
AA seq 907 aa
MSLLTSFKALKEILKPCSNLSTTTTTSSSSSSSLTQPSFSQEPEPALTISRKPPKSSLSK
QLQRLGEPFRPLSQQNDSLNARTQQPQNSQGLRNEAQVVKFEDRQEEEEKEREFEDLGRT
KLGQFQFEHTGPFEPLVLSLLGEVPVIRVPASINCRLLEHQREGVKFLYKLYLDNHGGVL
GDDMGLGKTIQTIAFLAAIFEKDEESGESITLKGNQVGKKGPVLIICPTSVIHNWESEFS
RWASFSVSLYHGTNRDLILEKLKAGGVEILITSFDTYRIHGSILSEVDWEVVIVDEAHRL
KNEKSKLYLACLEIKTRKRFGLTGTVMQNKIMELFNLLDWVAPGSLGSREHFREFYDEPL
KHGQRSTAPESFVRKADKRKEHLVSVLRKYMLRRTKEETIGHLMMGKEDNVVFCSMSELQ
KRVYRSMLQLPDIQCLVNKDLPCSCGSPLKQVECCKRIVPDGIIWPYLHRDNPEGCDSCP
YCLVLPCLVKLQQISNHLELIKPNPRDEPDKQKKDAEFASAVFGADVDLVGGNAQSENFM
GLSDVKHCGKMQALEKLMFSWASRGDKILLFSYSVRMLDILEKFLIRKGHSFSRLDGSTP
TNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR
FGQKRHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSGKIENRYFEGVQDCKEFQGELF
GICNLFRDLSDKLFTSEIIELHEKQGKGDGQCSTTMQELPELGTCFLHPDQAAVTTSSVC
ETSDNGNHESVTRKKPVLEELGILYTHRNEDIVNIGPGIRKNTEESIPGKDSINNPPVKR
RRKPDDVGGKRNDLPSKDWKKIQYSLLAQFMGMGEVEFSKWVLSATTSERENALRDYKKR
KEKMPDG
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgtctcttctcacgagtttcaaggccttgaaagaaatccttaaaccctgctcaaatctt
tcaacaacaacaacaacatcatcatcatcctcttcttctttaacacagccatcattctcc
caagaaccagaaccagcactaaccatctcaagaaagccaccaaaatcctctctttcaaag
caactccaacgtcttggagaaccttttcgtcctttatcacaacagaatgactcactaaat
gcaagaactcaacaaccccagaattcacaagggcttagaaatgaagcccaagttgtaaaa
tttgaagataggcaggaagaagaggagaaggagagggagtttgaggatcttgggagaact
aaattgggtcagtttcagtttgaacatactggaccctttgagccactagtcctttctttg
cttggagaggttcctgtcatacgggttcctgcttctattaactgcaggttgcttgaacat
caaagggagggagtaaaatttttatataagctatacctagacaaccatggaggtgttctt
ggtgatgacatgggactaggcaagaccattcagacaattgctttcctggctgctatcttt
gaaaaagatgaagaatccggtgagtccataacattaaagggaaaccaagtaggtaaaaaa
ggccctgtccttataatttgccccacttctgttatccacaattgggaaagtgaattctct
agatgggcaagctttagtgtttctctttaccatgggacaaaccgtgatttgatacttgag
aaactaaaagctggtggagttgagatactgattaccagttttgacacgtacagaattcat
ggcagcattttgtcagaggtggattgggaggttgtgattgttgatgaggcgcatcggctt
aaaaatgaaaagtcaaaattatatctagcatgtttagaaattaaaacgagaaaacgtttt
ggtctcacaggaactgttatgcagaataaaattatggagctgtttaatctccttgattgg
gttgctcctgggtctctgggatcaagggaacactttcgagagttttatgatgaacctctc
aagcatggccaaaggtcaactgcacctgaaagttttgtccggaaagctgataagcgcaaa
gagcacctggtgtcagttcttcgtaagtacatgcttagaaggacaaaggaggagaccatt
ggacatcttatgatgggaaaggaagacaatgttgtgttctgttccatgagtgaattgcaa
aagcgggtctataggagcatgttgcaactgccagacatccagtgccttgtaaataaggat
cttccatgtagttgtggcagccctctaaaacaggtggagtgctgcaaaaggattgtgcca
gatggaattatatggccctaccttcatagggataaccctgaaggttgtgattcgtgcccc
tattgccttgttcttccctgccttgtgaaactccaacagataagcaatcacctcgagctg
attaagccaaaccctagggatgaaccggataaacagaagaaggatgcagagtttgcctct
gctgtctttggtgctgatgtagatttggtgggaggaaatgcccaaagtgaaaatttcatg
ggcttgagcgatgtcaaacattgtgggaaaatgcaagcattagaaaagttaatgttttcc
tgggcttcacgaggtgacaaaattcttctcttcagctattctgtcaggatgctggacata
ctggaaaaatttctgatacgcaaagggcatagcttctcgagacttgatggttctactcca
actaacttgcgtcaatctttggttgatgacttcaactctagtccaagcaaacaggtgttc
cttatatcaactcgagctggtgggcttggattgaatcttgtcagcgcaaatcgtgtagtt
atatttgatccaaactggaatcctgcccaagacttgcaggcccaagacaggtcgtttcgt
tttggacagaagcggcatgttgtggttttccgccttcttgcagctggttcttttgaggaa
cttgtttattcccgtcaagtgtacaaacagcagctgtcaaatattgctgtttcagggaag
atagaaaaccggtattttgaaggcgttcaggattgcaaagaatttcagggtgagcttttt
ggtatctgcaatctgttccgtgatctatctgataagctttttaccagtgaaatcattgaa
ctacatgagaaacagggaaagggtgatggacaatgctctactacaatgcaagagttgcct
gaacttgggacctgtttccttcatcctgaccaagcagctgtaacaacttcatcagtatgc
gaaaccagtgacaatgggaatcatgagagtgttacaaggaagaaacctgttcttgaagag
ttaggtattctttacactcatcggaacgaggacattgtcaatattggacctggaattaga
aagaacacagaagaaagcatccctggtaaagatagcataaacaaccctcctgttaagcgg
cgaaggaaaccagatgatgtaggtgggaaaaggaatgatttgccatccaaggattggaaa
aagatccaatatagtctccttgctcagttcatgggaatgggggaggttgaatttagcaaa
tgggttctatcagcaaccacttcagagagagaaaatgcgcttcgggactacaagaagagg
aaggagaagatgcctgacggttga

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