Populus nigra (Lombardy poplar): 133677405
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Entry
133677405 CDS
T10372
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133677405
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
133677405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
INTS4_C
Cnd1
HEAT_2
HEAT_GCN1_C
VPS15-like_hel
CEP104-like_TOG
RTP1_C1
HEAT_EZ
MMS19_N
ParcG
Motif
Other DBs
NCBI-GeneID:
133677405
NCBI-ProteinID:
XP_061955431
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Position
17:complement(1420315..1427774)
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AA seq
948 aa
AA seq
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MEHQLLHTCLQSLNDNNNPLSLQALASLRSLIINPNTSDSTIYSILETLTRSLQLRTNSL
TTHHHILKLLTDLASHRTHLSSQILNSIHYSSLLFTESIQIATESLTSLASIANSDHNKI
DDQLYMSLCFAATSTSARLRLLRNGERLGIGMHVLFTVFLGFTEDPYPYVRKASLDGLLG
LCKSGNIFEDISVIEGCYFRAVELLQDNEHSVRSAAIRVVSEWGQMLIAAKEENDKIDWS
NQVFVQLCSMVRDMSVEVRVEAFNALGKIKLVSEDILLQTISKKVLAIMKEKNSHGQCTA
ERFEILASSYAGAFVHGLEDEFHEVRKSACNSLRIHTILYAEFARRSLSLLMDMLNDDSM
AVRLEALETLHHMATFECLHVQEIHMHMFLGSLLDNCDLIRSIARKIFKLVKLSDFKLFR
SSIHGLLQNLERYTKDEADVFSVLFFMGRSHGNFAAHVIKEVSQEIEPVLEGKLVLDSAR
VAAFLVLAISAPLSQNQNGQNIPPRLFSYAVTLLGRISSALREVVDQDTLLAYLSQCSRS
STRGTEVEEPSLLPVVDDAVLTHSRKDVNCPVGVPMLQTGNETSKVQPVISCELEDLATS
IVECQADELDEVMKSVNLILARVRDAWLLVQSRCTNVAVRALRDCKRELAMLTSASLESA
GILAFTMQYLQVMKLFAKIWEHVVWKIRSDETGGLEYLFGKLDVRLRELRYRYIGFSKEE
ELYVLELIVVACMLRLSKVEICCSPTTMKKLSAIISHIEILNNKGPIEPSNILMDAKKTV
HEIESSKAGISCSLFLITNLVDFFTLKQFSLCSRVRHINAELDVPGNDSENPLPFVSGLP
VAIPLDITLYNVSSENRLWLTIRMSQESTQFVFLDSNILGGCNEVKKFTFMAPFYRTPKA
CSFSSWIRIGMECALEDCHLVKHCGGPKRKLVYLCQEKEVHLCLVRRD
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcagttgcttcacacatgcctgcaatctctcaatgacaacaataatcctctc
tctctacaagccctagcttctcttcgctctctaataatcaaccctaacacctctgattcc
acaatctattcaatcctcgaaaccctaactcgctctctccaactccgcaccaattcactc
acaactcaccaccacatcctcaaactcctcactgaccttgcttcacaccgcactcacctc
tcctctcaaatcctcaactcaatccactatagctcactcctctttacagagtcaattcaa
attgccaccgagtcactcacttcactcgcttcgattgccaattccgatcacaacaaaatc
gatgatcagttatatatgtccctgtgttttgctgccacttcaacttccgctcgattgcgg
ctgctcagaaatggagagaggttaggcatagggatgcacgtgctgtttactgtgttttta
gggtttacggaagatccttacccatatgtgagaaaggcttctttggatggattgctaggg
ttgtgcaaaagtggcaatatttttgaagatatcagtgtgattgaaggttgttatttccgt
gctgttgagcttctacaagataatgagcattcagtacgctctgctgcaatccgcgtggta
agtgaatgggggcaaatgcttatagcagcaaaggaagagaatgataaaatagattggtca
aatcaagtatttgtgcagctctgttctatggtaagagatatgagtgtagaggtcagggtg
gaagcttttaatgctcttggcaagataaagttggtgtctgaggacattttattgcaaact
atatcaaaaaaagtcctagcaatcatgaaagagaagaactctcatggtcagtgtacagca
gaaaggtttgagattttggcgtctagttatgctggagcttttgtgcatgggcttgaggat
gaattccatgaggtgcgaaaatctgcttgtaactctttgcgcattcacactatcctctat
gctgagtttgctcgtcggtccttaagcttgttgatggacatgttgaatgatgattcaatg
gctgtaaggttagaagctttagaaacactgcatcacatggcaacctttgagtgtctgcat
gtgcaagagatacacatgcacatgtttctgggctctctacttgataactgtgatctaata
agatcaattgcaagaaaaatttttaaattggtgaagctgtccgattttaaattatttaga
tcatctattcatggcctccttcagaatttggagagatatacaaaggatgaagctgatgtc
ttctctgttttgttttttatgggtcgaagccatgggaactttgctgctcatgttatcaag
gaagtttctcaagagatagagccagttttggagggaaaattggtcttggatagtgcaaga
gtagctgcgtttcttgtacttgccatctcagctccactctcacaaaatcagaatggtcaa
aatattccacctagattattttcttatgcagtaaccttgctagggaggatctcttctgct
ttgagagaagttgtagaccaagatacacttttggcatatttgtctcagtgcagtagatcc
tccactcgtggcacagaagtggaggagccgtcattattgccagttgttgatgatgctgtt
ttaactcatagcagaaaggatgtcaattgtcccgttggggtgcccatgctacaaactggc
aatgaaacttccaaagttcagcctgtgatatcatgtgaattagaggatttagcaacttca
attgtagaatgccaggcagacgagcttgacgaagtaatgaaatctgtgaaccttatcctt
gcaagggtcagagatgcctggcttttggtacaatcaaggtgcaccaatgtagcagtgaga
gctctgagggattgcaagagagaattggcaatgttaacctctgcatctcttgaatctgct
ggtatattagcatttacgatgcaatacctccaggtaatgaaactgtttgctaagatatgg
gagcacgttgtatggaagataaggtccgatgaaacaggaggactggaatatctatttggg
aaactagacgtgaggctcagagaactgaggtatagatatatagggttttccaaggaagag
gagttgtatgtgttggagcttatagttgtggcctgtatgttaaggttatccaaagttgaa
atctgctgctctcctactacaatgaaaaaattgtctgctataatttcacatatagagatt
ctcaataataaaggacccattgaaccatccaatattttaatggacgctaagaaaacagtg
catgagattgagtcttctaaagctggtatctcatgcagtctcttcctgattacaaactta
gttgatttcttcacccttaagcagtttagtttatgctcaagagtaaggcatataaatgca
gaactggatgttcctggtaatgattctgaaaatcctcttccttttgtctctggactacct
gtggctatacctctggatattactttatacaatgtcagtagtgagaataggttgtggctt
acgataagaatgagtcaggagtcaactcaatttgtcttcttagattcgaacatattagga
ggctgcaatgaggtcaagaaatttacatttatggcccccttttacagaactccaaaagct
tgttcattctcatcatggattagaataggcatggaatgtgctcttgaggattgtcactta
gtgaaacactgtggaggtccaaaacgcaaattggtttatctttgccaggaaaaagaagtt
catttgtgtttggttcggagggactga
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