Populus nigra (Lombardy poplar): 133678671
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Entry
133678671 CDS
T10372
Name
(RefSeq) 4-coumarate--CoA ligase-like 9 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00130
Ubiquinone and other terpenoid-quinone biosynthesis
pnz00940
Phenylpropanoid biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pnz_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
133678671
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
133678671
Enzymes [BR:
pnz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
133678671
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Motif
Pfam:
AMP-binding
AMP-binding_C
Tachylectin
VirE1
Motif
Other DBs
NCBI-GeneID:
133678671
NCBI-ProteinID:
XP_061957087
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Position
18:complement(10662914..10668069)
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AA seq
576 aa
AA seq
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MATKSVPAQETTMTTHAINITKSGYCLESKTFQSLIPPATPPPPHQPLSITQFILSLLHS
SAIPTTQKNYLIMPSTGQSLTYSEAINQIYSLSSSLKSLYNLNKNDVSFILCPPSLHVPI
IYLSLLYLGVTISPANPLSSNSELTHQIQLSKPKIAFATSQTAHKLPSFPLGTILIDSPE
FISLLTQISKRDTATNHVEVSQSDMAAILYSSGTTGRVKGVSLTHRNVIASIAAFQMSSV
ELDPHAVSLLTLPLFHVFGFFLLINEFRWGRTLVLTERFDFEQVLKVVERYRVSDMPVAP
TIILTLLKSDLTNKYNLSSLRRFSCGGAPLSKEVAEKFKRKFPQAEIMQGYGLTEAGAVS
RIIEPEECNLQHASVGRLFGNMEAKIVDPLTGEAFGPGKRGELWLRGLSIMKGYVGDEKA
TAETLDSEGWLKTGDLCLFDSEGFLYIVDRLKELIKYKAYQVIELSDALSSIGFTSINVP
PFELEQLLLSNPEIADAAVIPYPDEEAGQIPMAYVVRKPGSSITEAQIMDSIAKQVAPYK
KIRRVAFTDGIPRSPAGKILRRELINHALSGALCKS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaagtcggtgccggcacaagaaaccaccatgaccacccatgcaatcaatatt
acaaaaagtggttactgcttggaaagtaaaacctttcaaagtctgataccacctgctact
ccaccaccaccgcatcaacctctctccataacccaattcatcctttctctcctccactcc
tctgccatcccaaccacccaaaaaaactaccttatcatgccctccacaggtcaatctctc
acttactctgaagccatcaaccagatttactctctttcttcatctctcaagagtctctac
aatttaaacaagaacgatgtctcttttatcctctgcccgccctctctccacgtccccatt
atttatctctctcttctttatcttggtgtcactatctctcctgccaaccccctaagttcg
aactccgagctgactcaccaaatccaactcagcaaacccaagatcgcatttgctacatcc
caaactgcccacaagcttccttcttttccccttggcacaatcctcattgactcccctgag
ttcatctccttgttgactcaaatctccaaacgagacactgctaccaaccacgttgaagtg
agtcaatccgacatggcagcgatcctatattcatcgggaacaactgggagagtcaaaggc
gtgtcattgactcacaggaacgtaatagcgtcaatcgcggcttttcaaatgagctctgta
gaacttgacccacatgcggtttcgttgcttacgctgcctttgtttcatgtttttggcttc
tttttgttgataaatgaatttcggtgggggaggacgttggttttgacggagaggtttgat
tttgagcaagtgttgaaggttgtagagagatatagagtgagtgacatgcctgtggcgcca
accattattctgacattactgaaatcggatttgactaacaagtataatttgagttcattg
cggaggtttagttgcggtggcgcgccattgagtaaagaggttgcagaaaaattcaaaagg
aaatttccacaggctgaaataatgcaggggtatggattaacggaggctggagctgtatct
aggataatagaacctgaagaatgtaacctgcagcatgcttctgttggtcggttgtttgga
aatatggaagccaaaattgttgatcctctaactggagaggcctttggtcctggcaagaga
ggggagctttggttgcgagggctatccattatgaaaggttatgtaggagatgagaaggca
actgccgaaaccttggattcagaagggtggttaaagaccggggatctttgtttatttgac
tccgagggcttcctctacattgttgataggctaaaggaattgataaagtacaaggcatat
caggtgatcgaattatccgatgccctttccagtataggatttacttcaataaatgtgccc
ccttttgagttggaacaattgctgctgtctaatcctgagattgccgatgctgctgtaatt
ccgtatcctgatgaagaggcagggcaaatccccatggcctatgtggtgaggaaaccagga
agcagcattaccgaggctcaaatcatggattccattgcaaaacaggttgcaccatacaag
aagataagacgagtggcttttaccgatgggatccccagatctcccgccggaaagatcttg
aggcgggagctcatcaatcatgctctctccggtgctctctgtaaatcataa
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