Populus nigra (Lombardy poplar): 133680965
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Entry
133680965 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133680965
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133680965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133680965
03041 Spliceosome [BR:
pnz03041
]
133680965
03032 DNA replication proteins [BR:
pnz03032
]
133680965
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133680965
Spliceosome [BR:
pnz03041
]
Complex A
U1 snRNP components
Sm proteins
133680965
U2 snRNP components
133680965
Complex B
U1 snRNP components
133680965
U4/U6.U5 tri-snRNP components
133680965
Complex C
U2 snRNP components
133680965
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133680965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
133680965
NCBI-ProteinID:
XP_061960020
LinkDB
All DBs
Position
1:complement(3936049..3938501)
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AA seq
289 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAP
LIQAQPGLAGPVRGVGGPSPGMMQPQFMRPPVPQHSAPPMTYPASSAPPPGGAPVVRPPG
QMPPGPYPGQGPPMGRGPPPPGPLQFSARPPQGFPMPPQFAQRPMGMPPQGQAPMMRGPP
APPRPGMPAPPPPRPGMPPPPGGHVPVFGPPRPGMPPPPNAQQQQNQQQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagctctaagatgctccaatacataaactaccggatgcgtgtgacc
atccaagatggtcggcagctggtagggaaattcatggcctttgatcgccacatgaacctt
gtacttggtgattgcgaggagttccgcaagctcccaccagcaaagggcaagaagaacaat
gaagagcgtgaggaccgccgaacacttggccttgttcttcttcgtggtgaagaggtcatc
tctatgactgttgagggccctcctcctcctgaagagtctcgcgccaaggctgtctctgct
gcagctgcttctggtcctggtcttggtcgtgctgctggccgcggaattcccactgctcct
cttattcaagcccagcctggccttgcaggtcctgttcgtggtgtgggtgggccttcccct
ggcatgatgcagccacaattcatgcgccccccagtcccacaacattctgctccacccatg
acttaccctgcatcaagtgctccaccacctggtggtgcacctgtggtccgaccacctggc
cagatgcctcctggaccatatcctggtcagggtccaccaatgggtcggggtccaccacca
ccaggtccactacaattttctgctaggcccccccagggtttcccaatgccaccacagttt
gcccagagacctatgggaatgccaccccagggacaggcaccaatgatgagaggaccacct
gctccaccaagacctggaatgccagcaccacctccaccccgtcctgggatgccacctcca
cctggtggtcatgttcctgtttttggaccacctcgtccgggaatgccgccacctcccaat
gcccaacagcagcagaatcagcaacaatag
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integrated database retrieval system
