Populus nigra (Lombardy poplar): 133687901
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Entry
133687901 CDS
T10372
Name
(RefSeq) 4-coumarate--CoA ligase CCL1-like
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00130
Ubiquinone and other terpenoid-quinone biosynthesis
pnz00940
Phenylpropanoid biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pnz_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
133687901
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
133687901
Enzymes [BR:
pnz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
133687901
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Motif
Pfam:
AMP-binding
AMP-binding_C
Peripla_BP_1
Motif
Other DBs
NCBI-GeneID:
133687901
NCBI-ProteinID:
XP_061963221
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Position
3:complement(10135312..10143010)
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AA seq
545 aa
AA seq
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MEAENDQAQEFIFRSKLPDIHIPNHLPLHTYCFENLSRFKDNPCLINGPTGEIHTYAEVE
LTSRKVASGLNKLGIKQGDVILLLLQNSPEFVFAFLGASIIGAISTTANPFYTPAEVAKQ
ATASKAKLIITQAVYTEKVQEFVKENDHVKIVTVDSPPENYLHFSELTNSDEDDIPAVEI
NPDDVAALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHEKDVILCVLPLFHI
YSLNSVLLCGLRVGSAILLMQKFEIVTLMELVQKYKVTIAPFVPPVVLAVAKCPVVDKYD
LSSIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSG
ACGTVVRNAEMKIVDPDTGRSLPRNQAGEICIRGSQIMKGYLNDPEATERTVDNDGWLHT
GDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPDISDCAVVPMKDEAAGEV
PIAFVVRANGSKITEDEIKQYISKQVVFYKRISRVFFTEAIPKAPSGKILRKDLRARLAT
GDLPH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggaaaatgatcaagcacaagaattcattttcaggtccaaactccccgatatc
cacatcccaaaccacctccctttacacacttattgctttgaaaacctttcccgattcaaa
gacaatccctgtttgatcaatggccctaccggtgaaatccacacctacgcggaagttgag
ctcacatcacgcaaagtcgcttctggcctcaacaagttaggcatcaaacaaggcgatgtt
atattgctgttgctccaaaactcgccagaatttgtgtttgcgtttctcggagcatcaatt
attggtgctattagcacaaccgcaaaccccttctacactcccgctgaggtcgcaaaacaa
gcaacagcatcaaaggcaaagctgataataacacaggcagtttacaccgagaaagtgcaa
gaattcgtcaaggaaaatgatcatgtcaaaatagtgaccgttgactctccaccagaaaac
tacttgcatttttcagagttgacaaattctgatgaggatgatattcctgctgtcgagatt
aaccctgatgatgtcgcggcactcccttattcgtcagggacaacaggtctccctaaaggt
gtcatgttgactcataaagggctcgttactagtgtggcacaacaagttgatggagagaac
cctaacctctattttcacgagaaggatgtgattctttgtgtgttgcctttgttccacatc
tactcgctcaattccgtgttactttgtgggctaagggttggttcagcaattttgcttatg
caaaaattcgagattgttacgttaatggagcttgtacaaaaatataaggtgacaattgcg
ccatttgtcccccctgtcgtcctcgcagttgcaaaatgtccagtggttgataagtatgat
ctttcttccattcggaccgtaatgtctggcgccgcaccaatggggaaggagcttgaggat
acagtaagggctaagctgcctaatgctaaacttggacagggatacggaatgacagaggca
gggcccgtgctatcgatgtgcttggcatttgcaaaggaaccctttgaaattaaatcaggt
gcctgtgggactgttgttagaaacgccgagatgaagattgttgaccccgataccggtaga
tccctgccacgaaatcaagccggagagatttgcattagaggtagccaaatcatgaaaggt
tatctaaatgaccctgaggccactgaaaggactgtagacaatgatggatggttacacacc
ggcgacattggatacatcgacgaagatgatgagctcttcatcgttgatcgattgaaagag
ttgattaaatacaagggttttcaagtagcacctgctgagcttgaagcaatgttgatcgct
catcccgacatctctgattgtgctgtagtacccatgaaagatgaagctgccggagaggtt
cctattgcttttgtggtgcgggcaaatggttccaagatcaccgaggacgaaatcaaacaa
tatatctcaaaacaggtggtcttttacaagagaattagtcgggtgttcttcacggaagcg
attcccaaggctccatccggaaaaatcttgagaaaagacctaagagcaaggcttgcaact
ggcgatcttcctcattaa
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