Populus nigra (Lombardy poplar): 133693541
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Entry
133693541 CDS
T10372
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1
KO
K12192
charged multivesicular body protein 2B
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133693541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133693541
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133693541
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
133693541
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133693541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YlqD
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
133693541
NCBI-ProteinID:
XP_061970756
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Position
5:2216333..2219778
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AA seq
219 aa
AA seq
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MNLFSKKPSPKAISLGCAEALRDSKREMQHATRGIEREIGALQLEEKKLVAEIKRTAKTG
NDAATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAQSSVAVGLKGASKAMEAMN
KQMAPAKQMKVIREFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVD
VASQLSAAPKGKITGKNREDASSSGIDELEKRLAAMRNP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttcagcaaaaaaccaagccctaaagcgatctctttgggttgtgcagaggct
cttcgagatagtaagagagaaatgcaacatgctactagaggtatagagagggaaatcgga
gcattgcagctagaagaaaagaagcttgttgcggagataaaacggacagctaagactgga
aatgacgcagcaactaaaattttagcccggcagctaatcaggctcaggcagcaaatagct
aacttacaaggcagtcgagctcaaatgagaggcatagcgacccatactcaggcaatgcat
gctcagtcttcagttgctgttggtttaaaaggtgccagtaaggcaatggaagctatgaat
aagcaaatggcgcctgcaaagcaaatgaaggttataagagagtttcagaagcagtcagca
caaatggatatgactactgaaatgatgtcggatgccatagacgatgccttggataacgat
gaggctgaagaggagactgaagagctgacgaatcaggtgctggatgaaattggtgttgat
gttgcctcacagttgtcagcggcaccaaagggtaaaatcacagggaagaatagagaggac
gccagcagttctggcattgacgagctagagaaacgtttggcagccatgagaaacccttga
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