Populus nigra (Lombardy poplar): 133694443
Help
Entry
133694443 CDS
T10372
Name
(RefSeq) transcription factor BHLH42 isoform X1
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133694443
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133694443
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
TSC22
ACT_ACR9_3rd
CCDC3_C
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
133694443
NCBI-ProteinID:
XP_061971924
LinkDB
All DBs
Position
5:complement(3673881..3685349)
Genome browser
AA seq
693 aa
AA seq
DB search
MATPPSSRLQTMLQAAVQSVQWTYSLFWQMCPQQGTLVWGDGYYNGPIKTRKTVQPMEVT
TEEASLQRSQQLRELYDSLSIGETNQPARRPCAALSPEDLTETEWFYLMCVSFSFPPGVG
LPGKAYARRRHVWLTGANEIDSKTFSRAILAKSARVQTVVCIPLLDGVVEFGTTDKVQED
LGLIQHVKTFFSDHHHRHLTPPKPALSEHSTSSPATSSHDHPRFHPPPIPPFYVAAEPSA
NAEQIDEDDEEDEEEEEHDSDSEAETSRDDHLEPRQAQNPHQVAAAEPSELMQLEMSEDI
RLGSPDDGSNNLDSDFPLTGPDNSMDHRSRADSYKAESARRWTMLQDNPFSGNLQPSASG
PPPLEDLAQEDTHYSQTISTILRSQPVWLAAEPSSIAYEARYHQSAFSRWTNRSDHLFHV
SVETTSQWLLKYILFSVPHLHSKNREDNSPKSRDGEAASRFRKGTPQDELSANHVLAERR
RREKLNERFIMLRSLVPFVTKMDKASILGDTIEYVKQLRQKIQDLETRNKQMESEQRPRS
VDRPQRTSTSDSLKKQKSGVTVVDRARSLGPVPDKRKMRVVEDSAGGGAKPKTVGALPQP
EPVVHKELETSVEVSIIESDALLELECGFREGLLLDIMQMLRELRIETIAVQSSLNNGIF
AGELRAKVKENVNGKKVSIVEVKRAIHKIIPHD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccgcctagtagccgcttgcagactatgttacaggctgcagtgcaatcggtt
caatggacatacagtctcttttggcaaatgtgtccacaacaagggaccttagtgtgggga
gatgggtattacaatgggccaatcaagactagaaaaacagtgcaaccaatggaggttacg
actgaagaagcctccttgcaaaggagtcagcagcttagagagctctatgattcattatca
ataggagagaccaaccagccagcacgtcgaccttgcgccgccttgtcaccggaggacttg
acggagactgagtggttctatctgatgtgtgtttccttctctttccctcctggtgttggg
ttaccaggaaaggcctacgcaaggagacgacacgtatggcttactggtgccaacgagatt
gatagcaaaactttctccagagcaatccttgccaagagtgctcgtgtacagactgtggtg
tgcatccctcttctcgatggtgttgttgaatttggcacaacagacaaggttcaagaggat
cttgggcttatccaacacgtaaaaaccttctttagtgaccaccaccaccgccaccttact
cccccaaaaccagctttatccgagcactccacttccagccctgccacctcctctcatgac
caccctcgtttccatcctccacccattcctcccttctatgtggctgcagagccatcagcc
aatgccgaacaaattgatgaggatgacgaagaagatgaggaggaggaggaacatgattca
gactcagaagccgaaaccagtcgcgatgatcacttagaaccgagacaagctcaaaaccct
catcaagttgcagcagctgagccgagcgagttgatgcaacttgagatgtctgaggatatc
aggcttggttctcctgatgatgggtctaataacttggactcggattttcctttgactggt
ccagacaactcgatggatcaccggagccgagctgactcgtataaagcggagtccgctcgg
aggtggacaatgttgcaagacaaccctttcagtggcaaccttcagccatcagcttcagga
ccacctccactagaagacttggcgcaagaggacacgcactactcccaaaccatatcgacc
atcctccgaagccaaccggtatggctggcagcagagccatcgtccattgcatacgaggca
cgctaccaccaatcagccttttccaggtggacaaaccgctccgatcacctcttccacgtg
tcagttgagaccacctctcagtggctcctgaaatacattctctttagcgtaccacacctc
cacagcaaaaaccgcgaggacaattccccaaagtcacgtgatggtgaagcagccagtcgg
ttccgcaaggggaccccacaggatgagctcagtgccaatcacgtgctagcagaacgacgc
cggagagagaagttaaacgagaggtttataatgctaaggtcgctagtgcccttcgtgacc
aaaatggacaaagcatcaatattaggggacacaattgaatacgtgaagcaactccgtcaa
aaaatccaggatttggagacgcgtaataaacagatggagagtgagcaacgcccaagatcg
gtggaccgtccacagaggacttctacttccgatagtttgaaaaagcaaaagagtggggtc
acagtggtggatcgggcgaggagtcttgggcctgtgccagataagaggaagatgagggtc
gtagaggatagtgctggtggtggtgccaagcccaaaacggtgggtgccttgccacagcca
gagccggtggtccataaggagctggagaccagcgtagaggtgtcgataatagagagtgac
gcattgttagagttggaatgtggttttagagaggggcttttattagacataatgcaaatg
ctaagggagctcaggatagaaactattgcggttcagtcttctttgaacaatgggatcttt
gcaggggaattgagggccaaggtgaaggagaatgttaatggaaagaaggtgagcattgtg
gaggtgaagagagcaatacataaaataataccccatgattga
DBGET
integrated database retrieval system
