Populus nigra (Lombardy poplar): 133695290
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Entry
133695290 CDS
T10372
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133695290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133695290
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133695290
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
SelP_N
DUF2937
Motif
Other DBs
NCBI-GeneID:
133695290
NCBI-ProteinID:
XP_061973193
LinkDB
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Position
5:complement(3782263..3786976)
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AA seq
539 aa
AA seq
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MNHCIPDWNFEGDLPVSNQKKPIEPGNDLVELLWRNGQVVLHSQAHRKPSPHVQKHDSPT
VKGSGSILNSSHLIQDDDAVSWIQYPLEDSFEKEFCSNFFSELPPPLSDQILEEKSAKFD
ASAPSQQQHQHQHQQQHQRQLNNNKPHVVSEFSGNPMPPPRIQVPEKNHAGVGGFGEAVN
ANFSQFSAPFKGGDFRTASGQFGGQGSGNSPQGEVRECSVVTVGSSNQIPHDRDMSRASS
NAMGTSTAFSTGPSMDDPRKIVSQSERGKTETLEATLTSSSGGSGSSFGRTCKQSAGPSS
SQKRKTIDTEDSEYQSEAAELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINE
KMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVFQVMWMGGGMAPMLFPGVQHFMS
RMGMGPPLPSMQNPMHLPRVQLVDQSISMAPTQNQGVMCQTPVLNPVNFHNQMQNPAFAD
QYARFMGFHMQAASQPMNMFRFGSQTVQQNQMMAPTSSVGGPLSAGTAVSDAPPSDKMG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattgtattcctgattggaattttgagggtgatcttcctgtctccaatcagaag
aaacccatagagccaggcaatgacctagtagagctgctatggcgaaatgggcaggtagtt
ttgcatagccaggcacacagaaaaccaagccctcatgttcaaaaacatgattcaccaaca
gtaaagggcagtgggtcaattctgaattcaagccatttgattcaagatgatgacgctgtg
tcttggattcaataccctcttgaagattcttttgaaaaggagttctgttccaattttttc
tcggaattgccaccaccactttctgatcaaattttggaagaaaagtcggctaaatttgat
gcctcggcaccttcacagcaacagcatcagcatcagcatcagcaacagcatcagcgacaa
ctcaacaacaataaacctcatgtggtttctgaattttcaggaaatccaatgccccctcca
agaattcaagtcccggagaaaaatcatgctggtgtaggaggatttggtgaagctgttaat
gctaacttttctcagttctccgccccctttaaaggcggtgattttagaactgcaagtgga
caatttggaggccaggggtctggaaactctccacaaggggaggtcagggagtgttcggtg
gtaacagtagggtcaagcaatcaaattccacatgatcgtgatatgagccgtgcttctagt
aatgctatggggactagtactgccttttctactggaccatccatggatgatccacgaaaa
atagtctcccagagtgagagaggcaaaactgagacacttgaggctactcttacctcatcc
tcaggtggatcaggtagtagttttggtagaacatgtaagcaatctgcaggacctagtagt
agccagaaaagaaaaactatagacacagaggattccgagtaccaaagtgaggctgccgaa
ctcgatctcgattcaatggcaggaaacaatccaaccaaacgatcaggatctacccgcagg
agtcgtgcagctgaagtgcataacctctcagaaaggagacggagggataggattaatgag
aagatgagagcattgcaagagctcatacctcactgctacaagacagataaagcatcaatg
ctggatgaggcaattgagtacttgaagtcacttcagttacaacttcaggtgtttcaggta
atgtggatgggtggtgggatggcccctatgctgtttccaggagtgcagcatttcatgtct
cgcatgggaatgggtccccctctgccttctatgcaaaatccaatgcatttgcctagggtc
caactcgttgatcaatccatttctatggctccgacacagaaccagggagtaatgtgccaa
actccagtgttgaatccagttaattttcacaaccagatgcaaaatccggctttcgctgac
cagtatgcgcgtttcatgggctttcacatgcaagccgcttctcagcccatgaatatgttc
cggtttggctcgcaaacagtacagcagaatcaaatgatggcaccaacaagcagtgttggc
ggacccttgagtgctggaaccgcagtcagtgacgctcctccaagtgacaagatgggttaa
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