Populus nigra (Lombardy poplar): 133700613
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Entry
133700613 CDS
T10372
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03420
Nucleotide excision repair
pnz04120
Ubiquitin mediated proteolysis
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133700613
04120 Ubiquitin mediated proteolysis
133700613
09124 Replication and repair
03420 Nucleotide excision repair
133700613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133700613
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133700613
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
133700613
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
133700613
Multi subunit type E3
SCF complex
Ring finger protein
133700613
Cul2 complex
133700613
Cul3 complex
133700613
Cul4 complex
133700613
Cul7 complex
133700613
Cul8 complex
133700613
Cul9 complex
133700613
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
133700613
TCR (transcription coupled repair) factors
Cul4-CSA complex
133700613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
133700613
NCBI-ProteinID:
XP_061980173
LinkDB
All DBs
Position
8:complement(9631294..9633858)
Genome browser
AA seq
110 aa
AA seq
DB search
MDTDVTMVPAGEASSSSSRKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQA
NQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacgtgacgatggttccggcaggcgaggcaagctcctcttcctcaaggaaa
ccgaagcgattcgaaattaagaagtggaatgctgttgctctttgggcttgggatattgtg
gtggataattgcgctatttgtagaaaccatatcatggatctttgcattgagtgccaagca
aatcaagctagtgctacaagcgaggagtgcactgttgcctggggtgtgtgcaaccatgcc
ttccacttccactgtatcagccggtggctcaaaacccgccaagtgtgtcctctcgataat
agtgagtgggagtttcagaagtatggccactaa
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