Populus nigra (Lombardy poplar): 133703436
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Entry
133703436 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133703436
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133703436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133703436
03041 Spliceosome [BR:
pnz03041
]
133703436
03032 DNA replication proteins [BR:
pnz03032
]
133703436
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133703436
Spliceosome [BR:
pnz03041
]
Complex A
U1 snRNP components
Sm proteins
133703436
U2 snRNP components
133703436
Complex B
U1 snRNP components
133703436
U4/U6.U5 tri-snRNP components
133703436
Complex C
U2 snRNP components
133703436
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133703436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
133703436
NCBI-ProteinID:
XP_061983920
LinkDB
All DBs
Position
9:complement(16965607..16969685)
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AA seq
286 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP
LVQAQPGLAGPVRGVGGPSPGMMQPQLSRPQLSAPPMTYPAGSGLPTGGAPIVRPPGQMP
PMPYPGQGPPMGRGPPPPGPPQFAARPPQGFPMPPQFAQRPMGGPPQPQVQMMRGPPAPP
RPGMSAPPPPRPGMPLPPGGHVPVFGPPRPGMPPPPNSQQQQNQQQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttcgaagatgctccaatatatcaactaccggatgcgtgtgacc
atccaagatggccggcagctggtagggaaattcatggcctttgatcgccacatgaacctt
gtacttggtgattgtgaggagttccgtaagctcccaccagcaaagggcaagaagaataat
gaggagcgtgaggaccgccgtactcttggccttgttctccttcgtggtgaagaggtcatc
tctatgactgttgagggccctcctcctcctgaagagtctcgtgccaaggctgtctctgct
gcagctgttgctggtcccggtcttggtcgtgctgctggccgcggaattcctactgctcct
cttgttcaggcgcagcctggcctagcaggtcctgtccgtggtgttggtgggccttcccct
ggcatgatgcagccacaactctctcgtcctcaactttctgctccgcccatgacctaccct
gcaggaagtggtctgccaactggtggtgcacctattgtccggccacctggtcagatgcct
cctatgccatatcctggccagggtccaccaatgggccggggtccacctccaccaggtcca
cctcaatttgctgctaggcccccacagggtttcccgatgccaccacagtttgcccagaga
ccaatgggagggccaccacagccacaggtacaaatgatgagaggaccacctgctccacca
agacctggaatgtcagcaccacctccaccccgtcctgggatgccacttccacctggtggt
catgttcctgtttttggaccccctcgtccgggtatgccacctcctcccaattcccaacag
cagcagaatcagcagcaatag
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integrated database retrieval system
