Polaribacter vadi: LPB03_14605
Help
Entry
LPB03_14605 CDS
T04504
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pob
Polaribacter vadi
Pathway
pob00300
Lysine biosynthesis
pob00550
Peptidoglycan biosynthesis
pob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB03_14605
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB03_14605
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pob01011
]
LPB03_14605
Enzymes [BR:
pob01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LPB03_14605
Peptidoglycan biosynthesis and degradation proteins [BR:
pob01011
]
Precursor biosynthesis
Amino acid ligase
LPB03_14605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
MobB
CbiA
LpxK
Motif
Other DBs
NCBI-ProteinID:
AOW18610
UniProt:
A0A1B8TQS1
LinkDB
All DBs
Position
3384723..3386189
Genome browser
AA seq
488 aa
AA seq
DB search
MKNLQDILYKVAIKQVFGNTNMDVNHLVFDSRKAENNDVFVAQKGVQVDGHLYIDKAISS
GASVIICEDFPNDKKEGVSYIQVADANVALAIMAANFYENPSTKFPVVGVTGTNGKTTIA
SLLYQLFHKAGYKVGLLSTVKILVDETEFKATHTTPDSLTINKYLDMMLEAGVEYCFMEV
SSHGIHQKRTEGLTFAGGIFTNLSHDHLDYHETFAEYRDVKKSFFDSLPKSAFALTNIDD
KNGNFMLQNTVAKKYSYALKTVGDYKTRILEKQLSGTLISVDGTEVWTKLIGVFNIYNLT
AIIATADLLGLEKLEILTIVSQLESVNGRFQYIISDDGVTAIVDYAHTPDALKNVLETIN
DIITNNEKVITVVGCGGDRDKTKRPKMAHIASQLSNQVIFTSDNPRTENAQTILDEMEVG
VSPENYKKTLTVLDRKQAIKTACKLSEPGDIILIAGKGHENYQEINGVRAHFDDLEEVTN
CFNQLKKN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ctgaagaatttacaagacatattatataaggttgccatcaaacaagtatttggaaataca
aatatggatgtaaaccaccttgttttcgactctagaaaagctgagaataacgatgttttt
gtagcgcaaaaaggcgttcaggtagatggtcatttatacattgataaagcgatttcttca
ggtgcaagtgtaattatttgtgaagattttccaaatgataaaaaagaaggagttagttat
attcaagttgctgatgcaaatgttgctttggcaataatggctgctaatttttatgaaaat
ccatcaacaaaatttccagtagttggggttacaggtactaatggaaaaacaacaatagct
tcacttttatatcaattatttcacaaagcaggttataaagtaggtttgttatcaactgta
aaaattttagttgatgaaaccgaatttaaagctacacatacaactccagattctttaact
atcaataaatatttagatatgatgttggaagctggtgtagaatactgttttatggaagtg
agttcgcatggaattcatcaaaaaagaacagaaggtttaacgtttgctggcggaattttt
accaatctttctcacgatcatttagattatcatgaaacgtttgcagaatacagagatgta
aaaaaatcgttttttgatagtttgccaaaatcggcatttgcgttaacgaatatcgatgat
aaaaatggcaactttatgttgcaaaacacggttgcaaaaaaatatagttacgctttaaaa
acggttggagattataaaactagaattttagaaaaacaactttcaggtactttaatttct
gtggatggcactgaagtttggaccaaattaattggtgtttttaatatctataatttaact
gcaattatagcaactgctgatttattaggattagaaaaactagaaatcttaacgattgta
agtcagttagaaagtgtaaatgggcgttttcaatatataatttcagacgatggagttaca
gcaattgtagattatgctcacactccagatgcattaaaaaatgtgttagaaactatcaac
gatattataaccaacaacgaaaaagtgattacagttgtaggttgtggaggtgatagagat
aaaaccaaaagaccaaaaatggcacatattgcttcgcaattaagcaatcaagttattttc
acgtcagacaatccaagaacagaaaacgctcaaaccattttagatgaaatggaagtggga
gtttctccagaaaactataaaaaaacactcacagttttagatagaaaacaagcaattaaa
actgcttgcaagttatcggaacctggagatattatattgattgcaggaaaaggacatgag
aattatcaagaaataaacggagttcgcgctcattttgatgatttagaagaagttacaaat
tgtttcaatcaactaaaaaagaactag
DBGET
integrated database retrieval system
