Paenibacillus odorifer: PODO_29765
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Entry
PODO_29765 CDS
T03326
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
pod
Paenibacillus odorifer
Pathway
pod01502
Vancomycin resistance
pod02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PODO_29765
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PODO_29765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pod02022
]
PODO_29765
01504 Antimicrobial resistance genes [BR:
pod01504
]
PODO_29765
Two-component system [BR:
pod02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
PODO_29765
Antimicrobial resistance genes [BR:
pod01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
PODO_29765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
VpsR
RMI1_N_C
DUF4761
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
AIQ77074
UniProt:
A0A1R0X8F8
LinkDB
All DBs
Position
complement(6627268..6627963)
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AA seq
231 aa
AA seq
DB search
MKRITILIADDEAEIADLVALHLQKEGYHILKVSDGRAAVQAIESQTIDLAILDIMMPGL
DGYEVTRHIREHHHLPIIFLSAKTSDLDKITGLVMGADDYMTKPFNPMELVARVNSQLRR
SIQFSQPAAITKSVLEVRGLMISPDEHTVTLYGEVIELTPKEFDILHLLVSHPKQVFSAE
SIFQQVWGDAYYESGNTVMVHIRTLRKKLGEDINKNKFIKTIWGVGYTFNG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatcaccattttaattgcggatgatgaggcggaaattgccgacttggtggcc
ttgcatttgcaaaaagaggggtatcatatcctcaaagtgtccgatggaagggcagcggta
caagccattgagtcgcaaacgatagatttggcgattctggatattatgatgccggggctg
gatggttacgaggtaacccgccatattcgggagcatcatcatctgccgattatttttctg
agtgctaaaacttccgatcttgataaaatcaccggactggttatgggcgcagatgattat
atgaccaaaccgtttaatccaatggagctggtcgcccgggttaattcccagttgcggcgt
tccatacaattcagtcagcccgcagccataactaaatcggtgctagaggttcggggattg
atgatttcaccggatgagcatacggttactctttatggtgaggtcatagagttaactcca
aaagagtttgatattttgcatttattggttagccatcccaagcaggtgtttagtgcggag
agcatttttcaacaggtgtggggcgatgcttattatgagagtgggaacacggtcatggtg
catatccgtaccttgcgcaaaaagctgggcgaagacatcaataagaataaattcattaag
acgatctggggcgttggatatacttttaatgggtaa
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