Polynucleobacter paneuropaeus: DPM16_02710
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Entry
DPM16_02710 CDS
T05507
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DPM16_02710 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poh03400
]
DPM16_02710 (nth)
Enzymes [BR:
poh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DPM16_02710 (nth)
DNA repair and recombination proteins [BR:
poh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DPM16_02710 (nth)
Prokaryotic type
DPM16_02710 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AWW44235
LinkDB
All DBs
Position
complement(514920..515576)
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AA seq
218 aa
AA seq
DB search
MNLEQRRSFFELLKANNPQPTTELEYSSPFELLIAVLLSAQATDVSVNKGTRKLFKIANT
PQALLNLGEEGVRPYIQHIGLFRTKGKHIQETCKILLEQHQGEVPRTREALEALPGVGRK
TANVILNTAFGEPTIAVDTHIFRVSNRTGLAPGKDVVMVEAQLMKRVPKEFLQDAHHWLI
LHGRYTCTARNPHCQECIVEPLCRFKQKTGKGKVRGDI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgagcagcggcgcagtttttttgagctattaaaggcgaacaacccacagccc
accactgaacttgaatacagctcaccctttgagctcttaattgcagtcctactttccgcg
caagctactgatgtctcagtaaataaagggacacgaaaactatttaagattgccaatacc
ccgcaagctttactgaatttaggtgaggaaggtgtccgcccctatattcagcatattggt
ttattcagaaccaaagggaagcatatacaagagacctgcaaaattttgctagagcagcat
cagggtgaagtccctcgcacgcgtgaggccctagaggctttgccaggggttggtagaaaa
acggctaacgtgatactgaacacagcgtttggcgagccaacaattgcagtcgatacccat
atttttagagtgtcgaatcgaacaggcttagcgccaggaaaagatgttgttatggttgaa
gcacaactcatgaaacgcgttcctaaagaatttttacaggacgcccatcattggcttatt
ctgcatggcagatatacttgcacggctcgcaaccctcactgtcaagaatgcattgttgag
ccactctgcagatttaaacaaaaaacgggaaaaggaaaagtgcgtggcgatatttaa
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