Metapseudomonas otitidis: PtoMrB4_39790
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Entry
PtoMrB4_39790 CDS
T06890
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00220
Arginine biosynthesis
poj00250
Alanine, aspartate and glutamate metabolism
poj00430
Taurine and hypotaurine metabolism
poj00910
Nitrogen metabolism
poj01100
Metabolic pathways
poj01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PtoMrB4_39790 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PtoMrB4_39790 (gdhB)
00220 Arginine biosynthesis
PtoMrB4_39790 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
PtoMrB4_39790 (gdhB)
Enzymes [BR:
poj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
PtoMrB4_39790 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_HM2
TetR_C_31
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BCA30002
UniProt:
A0A679GKP2
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All DBs
Position
complement(4338724..4343589)
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AA seq
1621 aa
AA seq
DB search
MAFFTAASKADFQHQLQVALAQHVSEQVLPQVTLFADQFFGIIALDELTQRRLSDLVGCT
LSSWRLLERFDPAKPQVRAFNPDYEKHGWQSTHTAVEVLHPDIPFLVDSVRMELNRRGYN
IHTLQNSVLSVRRDKKGALQEVLPKGTQGKDVQQESLMFLEIDRVAAPAALKALEKALEE
VLGEVRVAVADFKPMTAKARELLAWLDKAKLKVDPAELAEVKVFMNWLVDNNFTFLGYEE
FTVVDEGEAGGHLVYDEQSLLGVSRLRRAGLSKADLHVEREAVDYLRGPVLLSFAKAAEP
SRVHRPAYPDFVSIRELDAKGRVVKECRFMGLYTSAVYADSVTRIPYIRGKVAEIQRRSG
FDPRAHLGKELGQVLEVLPRDDLFQTPVDDLFATAMAIVQMQERNKIRLFLRRDPYGRFA
YALAYVPRDVYSTETRVKIQQILMERLQATDCEFWTFFSESVLARVQFILRLDPKNKAVV
DPVRLEKEVIQACRSWKDDYASLINETFGEAKGTRVLADFPKGFPAGYRERFAAHSAVVD
MQHLYSLSEQRQLVMSFYQPLTQGEQLLHCKLYHADTPLPLSDVLPILENLGLRVLGEFP
YRLTRQDGREFWIHDFAFTAAAGVEVDIQELNDTLQDAFVHIVGGDAENDAFNRLVLTAS
MPWRDVALLRAYARYLKQIRLGFDLSYIASTLLNHTNIAKELVRLFKTRFYLARKLSADD
LEDKQQKLEQAILGELDNVAVLNEDRILRRYLDLIKATLRTNFYQPDANGQNKGYFSFKL
SPRLIPDIPRPVPKFEIFVYCPRVEGVHLRFGDVARGGLRWSDREEDFRTEVLGLVKAQQ
VKNAVIVPMGAKGGFIPRRLPVGGSRDDIQAEAIACYRIFISGLLDITDNLKDGQVVPPA
NVVRHDADDPYLVVAADKGTATFSDIANGIAQEYGFWLGDAFASGGSAGYDHKGMGITAK
GGWVSVQRHFREHGIDVQKDNFTVIGIGDMAGDVFGNGMLLSDKLQLVAAFNHMHIFIDP
NPDAASSFVERKRMFDLPRSSWADYDTKLISEGGGIFLRSAKSIAISPQMKARFDIQADK
LTPTELLNALLKAPVDLIWNGGIGTYVKSSKESHADVGDKANDALRVDGRELRAKVVGEG
GNLGMTQLGRVEFGLNGGASNTDFIDNAGGVDCSDHEVNIKILLGEIVGAGDMTGKQRNT
LLAKMTDAVSNLVLGNNYKQTQALSLAQRRARERIGEYKRLIAALEAAGKLDRALEFLPS
DEELNERLANGQGLTRPELSVLISYSKIDLKESLLKSLVPDDDYLAREMETAFPPLLAEK
YGEAMRRHRLKREIISTQIANDLVNHMGITFVQRLKESTGMSAANVAGAYVVVRDVFRLA
HWWKQIEALDYKVPAELQLTLMDELMRLGRRATRWFLRSRREDQNAARDVGHFGPRVAEL
AGCLDELLEGPAREQWLARYQAYVEAGAPEELARVVAGTSHLYTLLPIIEAADVTGKDAA
EVAAAYFSIGGALDLSWYLQQITGLPVENNWQALAREAFRDDLDGQQRAITISVLQMADA
PADMDERVALWLEQHRPLVERWKVMLTELRAATGTDYAMYAVANRELMDLALSGQHGVNI
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcggccagcaaagccgacttccagcatcaactgcaggtggcactg
gcgcagcacgtcagcgagcaggtcttgccacaagtaaccctgttcgccgatcagttcttc
ggcatcatcgccctcgacgaactcacccagcggcgcctgtccgacctggtgggctgcacc
ctgtcgtcgtggcgcctgctggaacgcttcgatcccgccaagccccaggtccgcgcgttc
aacccggattacgagaagcacggctggcagtccacccacaccgccgtcgaagtgctgcac
ccggacatccccttcctggtggactcggtgcgcatggagctgaaccgccgcggctacaac
atccacaccctgcagaacagcgtgctcagcgtgcgccgcgacaagaagggcgcgctgcag
gaagtgctgcccaagggcacccagggcaaggacgtgcagcaggaatcgctgatgttcctg
gagatcgaccgggttgccgcccccgccgccctcaaggcgctggagaaggccctggaggaa
gtgctgggcgaggtgcgcgtcgccgtcgccgacttcaagccgatgaccgccaaggcccgc
gaactgctggcctggctggacaaggccaagctgaaggtggacccggccgagctggccgag
gtgaaggtcttcatgaactggctggtggacaacaacttcaccttcctcggctacgaggag
ttcactgtggtggacgagggcgaggccggcggtcacctggtctatgacgagcagtccctg
ctgggcgtctcgcgcctgcgccgcgccggcctgagcaaggccgacctgcacgtcgagcgg
gaagccgtcgactacctccgcggcccggtgctgctgtccttcgccaaggccgccgagccg
agccgcgtgcaccgccccgcctacccggacttcgtctccatccgcgagctggacgccaag
ggccgggtggtcaaggaatgccgcttcatgggcctgtacacctccgccgtgtacgccgac
agcgtcacccgcatcccctacatccgtggcaaggtcgccgagatccagcgccgctccggc
ttcgatccgcgtgcccacctgggcaaggagctgggccaggtgctggaggtgctgccccgc
gacgacctgttccagaccccggtggacgacctgttcgccaccgccatggccatcgtgcag
atgcaggagcgcaacaagatccgcctgttcctgcgccgcgacccctacggccgcttcgcc
tacgccctggcctacgtcccgcgtgacgtctactccaccgagacccgggtgaagatccag
cagatcctcatggagcgcctgcaggcgaccgactgcgagttctggaccttcttctccgaa
tccgtgctggcccgcgtgcagttcatcctgcggctggacccgaagaacaaggccgtggtc
gaccccgtgcgcctggagaaggaggtcatccaggcctgccgttcctggaaggacgactac
gccagcctgatcaacgaaaccttcggcgaggccaagggcacccgcgtgctggccgacttc
ccgaaaggcttccccgccggctaccgcgagcgcttcgccgcgcactcggcggtggtcgac
atgcagcacctgtacagcctctccgagcagcgccagctggtgatgagcttctaccagccg
ctgacccagggcgagcagctgctgcactgcaagctctaccacgccgacacgccgctgccg
ctgtccgacgtgctgccgatcctggagaacctcggcctgcgcgtgctgggcgagttcccc
taccgcctgacccgccaggatggccgtgaattctggatccacgacttcgccttcaccgcc
gccgccggcgtcgaggtggacatccaggaactcaacgacaccctgcaggacgccttcgtc
cacatcgtcggcggcgacgccgagaacgacgccttcaaccgcctggtgctgaccgcctcc
atgccctggcgcgacgtggccctgctgcgtgcctacgcccgctacctgaagcagatccgc
ctgggcttcgacctgtcctacatcgccagcaccctgctcaaccacaccaacatcgccaag
gaactggtgcggctgttcaagacccgcttctacctggcccgcaagctctccgccgacgac
ctggaagacaagcagcagaagcttgaacaggccatcctcggcgagctggacaacgtcgcc
gtgctcaacgaggaccgcatcctgcggcgctacctcgacctgatcaaggcgaccctgcgc
accaacttctaccagcccgacgccaacggccagaacaagggctacttcagcttcaagctg
agcccgcgcctgatccccgacatcccgcgtccggtgcccaagttcgagatcttcgtctac
tgcccgcgcgtcgagggcgtgcacctgcgcttcggcgacgtcgcccggggtggcctgcgc
tggtccgaccgcgaggaagacttccgcaccgaggtgctgggcctggtcaaggcgcagcag
gtgaagaacgccgtcatcgtgcccatgggcgccaagggcggcttcatcccccggcgcctg
ccggtgggcggcagccgtgacgacatccaggccgaggccatcgcctgctaccgcatcttc
atcagcggcctgctggacatcaccgacaacctcaaggacggccaggtggtaccgccggcc
aacgtggtgcgccacgacgccgacgacccctacctggtggtggcggccgacaagggcacc
gcgaccttctccgacatcgccaacggcatcgcccaggaatacggcttctggctgggcgac
gccttcgcctccggcggctccgccggctacgaccacaagggcatgggcatcaccgccaag
ggcggctgggtctcggtgcagcggcacttccgcgagcacggcatcgacgtgcagaaggac
aacttcaccgtcatcggcatcggcgacatggccggcgacgtgttcggcaacggcatgctg
ctgtcggacaagctgcagctggtggccgccttcaaccacatgcacatcttcatcgacccg
aacccggacgccgccagcagcttcgtcgagcgcaagcgcatgttcgacctgccgcgttcc
tcctgggccgactacgacaccaagctgatctccgaaggcggcggcatcttcctgcgcagc
gccaagagcatcgccatcagcccgcagatgaaggcgcgcttcgacatccaggccgacaag
ctgacccccaccgagctgctcaacgccctgctcaaggccccggtggacctgatctggaac
ggcggcatcggcacctacgtgaagtccagcaaggaaagccacgccgacgtcggcgacaag
gccaacgacgccctgcgcgttgacggtcgcgaactgcgtgccaaggtggtgggcgagggc
ggcaacctcggcatgacccagctcggccgcgtggagttcggcctcaacggcggcgccagc
aacaccgacttcatcgacaacgccggtggcgtggactgctccgaccacgaggtgaacatc
aagatcctgctgggcgagatcgtcggcgccggcgacatgaccggcaagcagcgcaacacc
ctgctggcgaagatgaccgacgccgtctccaacctggtgctcggcaacaactacaagcag
acccaggccctgtccctggcccagcgccgcgcccgcgagcgcatcggcgagtacaagcgc
ctgatcgccgccctggaggccgccggcaagctggaccgtgccctggagttcctgcccagc
gacgaggaactcaacgagcgcctcgccaacggccaggggctgacccgtcccgagctgtcg
gtgctgatctcctacagcaagatcgacctcaaggaatcgctgctcaaatccctggtgccg
gacgacgactacctcgcccgcgagatggagaccgccttcccgccgctgctggccgagaag
tacggcgaggccatgcgccgccaccgcctgaagcgcgagatcatcagcacccagatcgcc
aacgacctggtcaaccacatgggcatcaccttcgtgcagcgcctgaaggagtccaccggc
atgagcgccgccaacgtcgccggtgcctacgtggtggtgcgcgacgtgttccgcctggcg
cactggtggaagcagatcgaggcgctggactacaaggtgcccgccgagctgcagctgacc
ctgatggatgagctgatgcgcctcggccgccgcgccacccgctggttcctgcgcagccgc
cgcgaagaccagaacgccgcccgtgacgtcggccacttcggcccccgcgtcgccgaactg
gccggctgcctggacgaactgctggaaggcccggcccgcgagcagtggctggcccgctac
caggcctatgtcgaagccggcgcaccggaggaactggcccgcgtcgtcgctggcaccagc
cacctgtacacgctgctgccgatcatcgaagccgccgacgtcaccggcaaggacgccgcc
gaagtggccgccgcctacttctccatcggcggcgcgctggacctgtcctggtacctgcag
cagatcaccggcctgccggtggagaacaactggcaggcgctggcccgcgaagccttccgc
gacgacctcgacggtcagcagcgggcgatcaccatctccgtgctgcagatggccgatgcc
ccggcggacatggacgagcgcgtcgccctctggctggaacagcaccgtccgctggtggag
cgctggaaggtgatgctcaccgaactgcgcgccgccaccggcacggactacgccatgtac
gccgtggccaaccgcgagctgatggacctggccctgagcggccagcacggggtgaacatc
ccctga
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