Pseudarthrobacter oxydans: SMD14_16785
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Entry
SMD14_16785 CDS
T09608
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMD14_16785 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_16785 (nth)
Enzymes [BR:
pok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SMD14_16785 (nth)
DNA repair and recombination proteins [BR:
pok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMD14_16785 (nth)
Prokaryotic type
SMD14_16785 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
YAF2_RYBP
Motif
Other DBs
NCBI-ProteinID:
WPU11438
LinkDB
All DBs
Position
complement(3674761..3675555)
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AA seq
264 aa
AA seq
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MPVVSSESVLALKRRARRINRALAEKYPYAHAELDFRNPFELLVATVLSAQTTDVTVNQV
TRVLFARYPDARALAEADPGDLETILKPTGFFRAKARNVIALCTRLVDEYNGVVPGRLED
LVTLPGVGRKTANVVLGNGFGIPGISVDTHFARLANRFGWTQSDDPVQIERDVAELFDRK
DWTMLSHRVIFHGRRVCHARKPACGACPVATWCPSFGLGETDPAKAAKLLKYELAPGSEA
LLEQLLAETHRAAEIRMESQQRTP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggtctcttccgaatcggtgctggcgctgaagcggcgggcacggcggatcaac
agggcgttggccgagaagtatccatacgcccacgccgagctcgacttccgcaacccgttc
gaactgctcgtggccacggtcctttccgcccagaccactgacgtgacggtcaaccaggtc
acccgggtgctgttcgcgcgctacccggacgcccgggccctggccgaggcggatcctggc
gacctggaaacgatcctgaagcccacggggttcttccgggccaaggccaggaacgtcatt
gcgctctgcacccgccttgtggacgagtacaacggcgttgtaccggggcggctggaggac
ctggtcaccctgccgggcgtgggccgcaagacggcaaacgtggtgctggggaacggcttc
ggcatccccggcatctcggtggacacccacttcgcccggctcgccaaccgctttggctgg
acgcagtccgacgaccccgtgcagatcgaacgggacgtggccgagctgttcgaccggaag
gactggaccatgctgtcccaccgggtgatcttccacgggcggcgggtgtgccacgcgcgg
aagccggcctgcggggcctgccccgtggccacgtggtgccccagcttcgggctgggcgaa
acggatcccgcgaaggctgcgaagctgctgaagtacgagctcgctcccggcagcgaggca
ctgctggagcagcttttggccgagacccaccgcgccgccgaaatccggatggaatcccag
cagaggacaccgtga
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