Polynucleobacter sp. KF022: PKF022_04830
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Entry
PKF022_04830 CDS
T10441
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKF022_04830 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_04830 (nth)
Enzymes [BR:
polk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKF022_04830 (nth)
DNA repair and recombination proteins [BR:
polk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKF022_04830 (nth)
Prokaryotic type
PKF022_04830 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDT74818
LinkDB
All DBs
Position
complement(463620..464279)
Genome browser
AA seq
219 aa
AA seq
DB search
MMNLEKRRAFFEQLKANNPKPETELEYSSPFELLIAVLLSAQATDVSVNKGTRKLYKVAN
TPQALLDLGEEGVRPYIQHIGLFNSKGKHIQETCRLLLEKHGGEVPQTREELEALPGVGR
KTANVILNTAFGQPTIAVDTHIFRVSNRTGLAPGKDVVKVEEQLLKRVPKEYLHDAHHWL
ILHGRYTCKARNPDCAECIVEPLCGFKQKTGKGKVRGDI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatctagaaaagcgtcgtgctttttttgagcagctcaaagcaaataatcctaaa
ccagaaaccgagctggaatacagttcgccctttgaacttcttattgcagtactgctctct
gcacaagcaacagatgtatctgttaacaagggaacacgcaaactctataaggttgcgaat
accccgcaagctcttttagatcttggtgaagaaggtgtaagaccctacattcagcatatt
ggtttatttaattctaaaggtaagcatattcaggaaacctgtcgactgctattggaaaaa
catgggggtgaagtacctcagactcgtgaagaattagaagccttaccaggcgtcggcaga
aaaaccgcgaatgtaattctcaatacagcttttggtcaacctaccatcgctgttgatact
catatattcagagtctccaaccgaacgggcttagcgccaggcaaggatgtcgtcaaggtg
gaggagcaattacttaaacgcgtaccaaaagagtatctacatgatgcccatcattggctt
attctgcatggtagatatacctgtaaggcgcgcaaccctgattgcgcagaatgcatagtg
gagccactatgtggattcaaacaaaaaactggcaaaggaaaagttcgtggcgatatttaa
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