Polynucleobacter sp. SHI8: PSHI8_03790
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Entry
PSHI8_03790 CDS
T10387
Name
(GenBank) MexH family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln01501
beta-Lactam resistance
poln01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSHI8_03790
01503 Cationic antimicrobial peptide (CAMP) resistance
PSHI8_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
poln03036
]
PSHI8_03790
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poln02000
]
PSHI8_03790
01504 Antimicrobial resistance genes [BR:
poln01504
]
PSHI8_03790
Chromosome and associated proteins [BR:
poln03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PSHI8_03790
Transporters [BR:
poln02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PSHI8_03790
Antimicrobial resistance genes [BR:
poln01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSHI8_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
Beta-barrel_YknX
YknX_C
BSH_CzcB
RND-MFP_C
Biotin_lipoyl
BSH_CusB
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
BDW12743
LinkDB
All DBs
Position
371638..372825
Genome browser
AA seq
395 aa
AA seq
DB search
MNIFKKSTSSVSSNSNQSPLRKRMIWMLIGVFVLMGLIIGFNLFKTVMIKKYLAGAGSPP
ATVTTMVVADDEWQPQLTASGSLRAYRGVELSTEVNGLVKNVYAKSGMDVKEGYLLMAMV
QDSDRAQLQALQAQADLAKVVNERDRQQLAIEAISKNAFDSSSADYKAKIAQVDQQAALV
AKKNLKAPFSGRVGVVSINPGQFINSGDKIMTLQTIDPVFVDFTLPQSLVAQIKKDQIVN
VNSDAFGDQTFKGKITAISPKVDSNTRNIQVEALVSNPDKKLLPGMFANLKIDSGEKLRY
ITVPQTAVTYNPYGSVIYIAKEGAGKDKDGKASLEAQQVFVTTGPTRGDQVAILKGIQVG
DTIVTSGQLKLKNGTPLIVNNAVIPANNANPKPQE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttcaaaaagtctacatcttctgtttcttcgaatagcaatcagtcacctctt
cgtaaaagaatgatttggatgttgattggtgtttttgtcttaatgggactcattattggt
tttaatttatttaagaccgtcatgattaaaaaatatttggctggggcgggatctcctcct
gcaacggtgaccacgatggttgttgctgatgacgaatggcaaccgcagcttacagcatca
gggagcttaagggcttatcgtggtgtagagttaagtacagaagtgaatgggctcgtaaaa
aacgtctacgccaagtctggcatggatgtcaaagaaggttatctcttaatggcgatggtg
caagattcagaccgtgctcagttacaagcattacaagcacaagctgatcttgctaaagta
gtcaatgaacgcgatcgtcaacaattggccattgaagcaatcagtaaaaatgcatttgat
tcgagtagtgctgactataaggcgaagatagcgcaggtcgaccaacaagctgcactagtt
gccaaaaagaacttgaaggcaccattttctggaagagttggtgttgtgtctattaaccct
ggtcagtttattaatagtggagacaaaataatgactctgcaaacgattgatccagtcttt
gtagactttacccttccacaaagtctcgttgcacagataaagaaagatcaaatcgtcaat
gttaattcagatgcatttggggatcaaacctttaaaggaaaaattacagccatcagtcca
aaggttgattcgaatacgagaaatattcaagtagaagctttggtgagtaatcctgacaaa
aagttgttgcctggaatgtttgccaacttaaaaatcgatagtggagaaaaattacgttat
atcactgtccctcaaacagcggtgacttataacccctatggatctgtgatctacattgct
aaagagggcgcaggcaaagataaagacggaaaagcgagcttagaggctcagcaagtattt
gtgactactggacctactcgtggtgatcaagtggcaatcttaaaaggtatccaagtagga
gatacgattgttactagtggacaactgaagctgaagaatggcacaccattgattgtgaat
aatgcagtaattcccgcaaacaatgctaatcctaagccacaagaataa
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