Polaribacter sp. Q13: JOP69_12480
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Entry
JOP69_12480 CDS
T10394
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
polq Polaribacter sp. Q13
Pathway
polq01501
beta-Lactam resistance
polq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
polq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JOP69_12480
01503 Cationic antimicrobial peptide (CAMP) resistance
JOP69_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
polq03036
]
JOP69_12480
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
polq02000
]
JOP69_12480
01504 Antimicrobial resistance genes [BR:
polq01504
]
JOP69_12480
Chromosome and associated proteins [BR:
polq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JOP69_12480
Transporters [BR:
polq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JOP69_12480
Antimicrobial resistance genes [BR:
polq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JOP69_12480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_CusB
Beta-barrel_RND
BSH_RND
BSH_CzcB
BSH_YknX
RND-MFP_C
Biotin_lipoyl
YknX_C
HH_MFP_RND
HH_EMRA
Beta-barrel_RND_2
Phage_VG64
BSH_ALG44
BSH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QVY64581
LinkDB
All DBs
Position
complement(2984900..2986033)
Genome browser
AA seq
377 aa
AA seq
DB search
MKHYKLITLLSLSAFLVFASCSKDEKQAKAAVSRPAPSFPVVAMQTKTVTGYKEYPTSIE
GIVNSAVRAKVSGYIQKVMVDEGQKVRKGQVLFKLETQSLSQDAGAAKARINVAQVEVNK
LIPLVEKNIISPVELETAKANLAQAKANYSSVSASIGYGTIRSQVDGFVGAINYREGALV
SPSDPTPLTTVSDISKVYAFFSLNESEYLDFLQNAKGSNLKEKLANYSAINLILANGSTY
SEKGKVETSSGQVNKNTGTVSLRAVFNNPNQLLTNGNSGKIQIPTVYENAIVIPQQATYE
QQGNIILFKLSEDNKVTSSIIKVKAIIDNLYVVASGVDLKDKIIASGVGKLRNGMAITPQ
KTSFEEAIKPVAILFKN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattacaaattaataacattactatcattaagcgcctttttggtctttgcaagt
tgctcaaaagatgaaaaacaagcaaaagctgctgtaagccgaccagcaccttcatttcct
gtagttgccatgcaaactaaaacagtaacaggttataaagaatacccaacaagtatagag
ggtattgtaaatagtgctgtaagagcaaaggtttctggatacattcaaaaagtaatggta
gatgaaggccagaaagtacgtaaaggacaagtattatttaaattagaaacacaatcttta
agtcaagatgctggtgctgccaaagcacgtattaatgttgctcaagtagaagttaacaaa
ttaataccattggtagaaaaaaatattattagtccagtagaattagaaactgctaaagca
aatttagcacaagccaaagcaaattatagtagtgtttctgcaagtataggttacggaact
ataagaagccaagtagatggttttgttggtgcaattaattatagagaaggggccttggta
agtccttcagacccaactccattaactaccgttagtgatattagtaaagtatatgctttt
tttagtttaaatgaaagtgagtatttagactttttacaaaatgctaaaggcagcaattta
aaagaaaaactagccaattattctgctatcaacttaattttagcaaacggaagtacgtat
tctgaaaaaggtaaagtagaaacaagtagcggtcaagtaaataaaaacacaggaactgtt
agtttaagagctgtttttaacaatccaaaccaactattaacaaatggtaatagtggtaaa
attcaaattccaacagtttatgaaaatgcaattgtgattccacaacaagcaacttatgaa
caacaaggaaacattatattgtttaaattaagtgaagacaacaaggttacaagcagtatt
attaaggtcaaagctataatagataatttatatgttgtagcatctggtgtagatttaaaa
gataaaattatagcatctggcgttggtaaattaagaaacggtatggctattacaccacaa
aaaacctcttttgaggaggcaattaaacccgtagcaattttatttaaaaactag
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