Polynucleobacter sp. SHI2: PSHI2_16300
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Entry
PSHI2_16300 CDS
T10386
Symbol
sucB
Name
(GenBank) dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00020
Citrate cycle (TCA cycle)
poly00310
Lysine degradation
poly00380
Tryptophan metabolism
poly00785
Lipoic acid metabolism
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
poly01120
Microbial metabolism in diverse environments
poly01200
Carbon metabolism
poly01210
2-Oxocarboxylic acid metabolism
Module
poly_M00009
Citrate cycle (TCA cycle, Krebs cycle)
poly_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSHI2_16300 (sucB)
09105 Amino acid metabolism
00310 Lysine degradation
PSHI2_16300 (sucB)
00380 Tryptophan metabolism
PSHI2_16300 (sucB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PSHI2_16300 (sucB)
Enzymes [BR:
poly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
PSHI2_16300 (sucB)
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Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
BSH_YhbJ
BSH_CusB
BSH_RND
BSH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
BDW11548
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Position
complement(1665108..1666334)
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AA seq
408 aa
AA seq
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MSIFEVKVPQLSESVAEATLLQWKKKAGDSVAQDEILIEIETDKVVLEVPAPSAGVLSEI
VIADGGTVVSDQVIAKIDSESKGVASPAASTPTPVAAPVAAVAASSAPSSNSAAGIAMPA
AAKILAEKNMLATDVTGSGKDGRVTKADALSATPAKASAPAPQKLASLPINMPLGDRPEE
RVPMSRLRARIAERLLESQASNAILTTFNEVNMAPVMNMRNKYKEVFEKEHGVKLGFMSF
FVKAAVHALKKYPVLNASVDGTDIVYHGYFDIGIAVGSPRGLVVPILRDVDQMNLAEIEK
KIAEFGVKARDGKLTLDDLTGGTFSISNGGVFGSMLSTPIINPPQSAILGIHATKDRAVV
EDGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKEILEDPARLLLDI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttttgaagttaaagtaccccagttgtctgaatcagttgcagaagcaaccctt
ttgcaatggaagaaaaaagctggtgacagcgttgctcaagatgagattctcattgagatt
gagactgataaagtggtactcgaagtgcctgcaccttcagctggggttttatcggaaatc
gtcattgctgatggtggaacagttgtttcagatcaagtgattgcgaagattgatagtgaa
agtaaaggggtagcatcacctgcagcttcaaccccaacgcctgttgcggcacccgtagcg
gctgttgcggcgtcttctgcaccaagctccaatagcgcggcaggtatagctatgccagca
gcggcgaagatacttgcagaaaaaaatatgttagcaacagatgttactggttcaggtaaa
gatggccgtgtaactaaagccgatgcattgtccgcaacaccagctaaagcaagtgcacct
gcaccgcaaaaattagcctcattacctatcaatatgccattgggtgatcgcccagaagag
cgtgttccaatgagccgtttgcgtgccagaattgcagaacgactcttagagtcacaagca
agtaatgcaatcttgacgacatttaatgaagtcaacatggcgccagtcatgaatatgcgt
aataaatataaagaagtgtttgaaaaagagcatggtgtgaaattagggtttatgtctttc
tttgtaaaagcagcagttcatgccttaaagaaatatcctgtattaaatgcttctgtagat
ggtacagatattgtttaccacggttattttgatattggtatcgcagttggatcgccacgt
ggtttggttgtgccaattttgcgtgatgtggatcaaatgaatcttgcagaaatcgagaaa
aagattgctgaatttggagtgaaagctcgtgatggcaagctcaccttagatgatttaaca
ggtggaacattctccatctctaacggtggtgtatttggttccatgttgtcgacaccaatt
attaatcctccccaatcagctattttgggtattcatgcaacgaaagatcgtgccgtggtt
gaagatggtcagattgtgattcgtccaatgaactatttagcgatgtcctatgaccaccgc
atcattgatggtcgtgaggctgtccttgggttagtcgccatgaaggagatccttgaagac
cctgccagactattactcgatatttaa
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