Polaribacter sp. MED152: MED152_01800
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Entry
MED152_01800 CDS
T02533
Symbol
nth
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MED152_01800 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_01800 (nth)
Enzymes [BR:
pom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MED152_01800 (nth)
DNA repair and recombination proteins [BR:
pom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MED152_01800 (nth)
Prokaryotic type
MED152_01800 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
EAQ41408
UniProt:
A2U2B3
LinkDB
All DBs
Position
complement(387483..388145)
Genome browser
AA seq
220 aa
AA seq
DB search
MTKSEKVNFVIETLQNLYPEIPVPLDHKDPYTLLIAVLLSAQCTDVRVNKVTPFLFEKAD
NPFDMVKMTQEQIKEIIRPCGLSPMKSKGIYGLSKILIEKYNGEVPKSFEGLEELPAVGH
KTASVVMSQAFGVPAFPVDTHIHRLMYRWNLSNGKNVNQTEKDAKRLFPKELWNDLHLQI
IWYGRDYSPARGWNLDNDIITKTIGRKTVLNEYYKTKKTP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagaaaaagtaaattttgtaattgaaaccttacaaaatttgtatcctgaa
attccagttcctttagaccataaagatccttacactttattaattgcagttttactttct
gcacaatgtacagatgtaagggtaaataaagttactccgtttttatttgaaaaggcagat
aacccttttgatatggttaaaatgacccaagaacaaataaaagaaattattagaccttgt
ggtttgtctccaatgaaatctaaagggatttatggcttatctaaaattttgatagaaaaa
tataatggtgaagttccaaaatcttttgaaggtttagaggaattacctgcagttggtcat
aaaactgcaagtgttgttatgagtcaggcttttggtgtgcccgcttttcctgtagatact
catattcatcgattaatgtacagatggaatttatctaatggtaaaaacgtaaaccaaaca
gaaaaagatgcgaaacgcctttttccgaaagaattatggaatgatttgcacttacaaatt
atttggtatggtagagattactctcctgctcgtggttggaatttagacaatgatattatc
actaaaaccataggtagaaaaacagttttaaatgaatattataaaacaaaaaaaacacct
taa
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