KEGG   Pongo abelii (Sumatran orangutan): 100173826
Entry
100173826         CDS       T01416                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100173826 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pon03041]
    100173826 (SMNDC1)
Spliceosome [BR:pon03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100173826 (SMNDC1)
 Complex B
    100173826 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100173826 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100173826
NCBI-ProteinID: NP_001126821
Ensembl: ENSPPYG00000002643
UniProt: Q5R591 A0A2J8W7A0
LinkDB
Position
8:complement(117312845..117324759)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatttagcaaagcagctggcaagctacaaagctcagctccagcaagttgaa
gctgcattatctggaaatggagaaaatgaagatttgctaaaattgaagaaagatttacaa
gaagttatagaactaaccaaagaccttctgtcaactcaaccttctgagactcttgcaagt
tcagacagttttgcttccactcaacctactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aatggcaccgctgcaatcacctttgctggttatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaagacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gctcagagaataaaagaacttgagcaggaaagagaggaccagaaagtgaaatggcaacaa
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtgactggcaaagttggagtaggaacctgtggaattgctgataaacct
atgacacaatatcaagatacctctaaatacaatgtcaggcatttgatgcctcaataa

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