Pongo abelii (Sumatran orangutan): 100434567
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Entry
100434567 CDS
T01416
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100434567 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100434567 (KDM2A)
04121 Ubiquitin system [BR:
pon04121
]
100434567 (KDM2A)
03036 Chromosome and associated proteins [BR:
pon03036
]
100434567 (KDM2A)
Enzymes [BR:
pon01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100434567 (KDM2A)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100434567 (KDM2A)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100434567 (KDM2A)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100434567 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100434567 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
100434567
NCBI-ProteinID:
XP_024110861
Ensembl:
ENSPPYG00000003001
UniProt:
A0A2J8U0A0
LinkDB
All DBs
Position
9:complement(7395722..7545865)
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSHNGQVWDPQCAPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaaggaaaaagaacttttgacttg
gaagagaaactgcacaccaacaaatataatgccaattttgttacttttatggaaggaaaa
gattttaatgtagagtatattcagcggggtggcttgagagatcctctgattttcaagaat
tctgatggactcggaataaaaatgccggatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgcatggtggatgtcatggacgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaggagcgagagaaactc
tataatgtcatcagcctcgagtttagccacaccaggctggagaatatggtgcagaggccc
tccacggtggatttcattgactgggtagacaacatgtggccaaggcacttgaaggaaagc
cagactgaatcaaccaatgccatcttggagatgcagtaccctaaagtgcagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgtcagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattagtgtttgggggcaattttttg
catagcttcaacatccctatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagtttcgctatccattctactatgagatgtgttggtatgtgttggagcgctat
gtgtactgcataaccaaccgttcccacctaaccaaggaatttcagaaagagtccctcagc
atggatttggagttaaatgggttggagtctgggaatggggacgaggaagcagtggatcga
gaaccccgacgcttgagcagcaggcgttctgtcctcactagccctgtagcgaatggagtc
aacctggattatgatggactgggcaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggactcatcttctgactctagccggggctcccacaatggacaagtgtgggat
ccccagtgtgctccccgaaaggacaggcaagtgcatctgacccattttgagcttgaaggc
cttcgctgccttgtagataagttggagtctctgccactgcacaagaaatgtgtccccaca
gggatagaagatgaagatgctctcattgctgatgtaaagattttgctggaggagcttgcc
aacagtgatcccaagttagccctcactggagttcctatagtacagtggccaaaaagggat
aagcttaaattccccactcggccaaaggtgcgggttcctaccatccccattacgaagcct
cacactatgaaaccagctccacggttaacacctgtgaggccagctgctgcctccccgatt
gtgtcaggagccagacggagacgagtgcgatgtcgaaaatgcaaagcctgtgtgcaagga
gagtgtggtgtttgccactactgcagagacatgaagaagtttggggggcctggacgcatg
aagcagtcctgtgtcctccgacagtgcttggcacccagactgcctcattcagtcacatgt
tccctctgtggagaggtggatcagaatgaagagacacaagactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ttgcttaatgaagaattgccaaattgctgggaatgtccaaagtgctaccaggaggacagc
tcggagaaagcccagaagcggaaaatggaagagagtgacgaagaagctgtgcaagccaaa
gtcctgcggcccctgcggagctgcgatgagcctctcacgcccccgcctcattcacccact
tccatgctgcagctcatccatgacccggtttccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctacagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggcc
attgtgccccaggccctcagtggcatcatcaagaggcagccagtcagccttgacctcagt
tggaccaacatctctaaaaagcaactgacatggcttgtcaataggctgccaggactgaaa
gacctcctcctagcaggctgctcctggtctgcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgcttactccaccggctgataaaccaggtcaggacaatcgcagcaagctccggaac
atgaccgacttccggctggcaggccttgacatcacagatgccacgcttcgcctcatcatt
cgccacatgcccctcctgtctcgactcgacctcagtcactgcagccaccttacagatcag
tcctccaatctactcactgctgtcgggtcttccactcgctactctctcacagagctcaat
atggcaggttgcaataaattgacagaccagaccctgatctacctacggcgcattgccaac
gtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagcctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
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