KEGG   Pongo abelii (Sumatran orangutan): 100443317
Entry
100443317         CDS       T01416                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ alpha 1 chain
  KO
K06752  MHC class II antigen
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04145  Phagosome
pon04514  Cell adhesion molecules
pon04612  Antigen processing and presentation
pon04640  Hematopoietic cell lineage
pon04658  Th1 and Th2 cell differentiation
pon04659  Th17 cell differentiation
pon04672  Intestinal immune network for IgA production
pon04940  Type I diabetes mellitus
pon05140  Leishmaniasis
pon05145  Toxoplasmosis
pon05150  Staphylococcus aureus infection
pon05152  Tuberculosis
pon05164  Influenza A
pon05166  Human T-cell leukemia virus 1 infection
pon05168  Herpes simplex virus 1 infection
pon05169  Epstein-Barr virus infection
pon05310  Asthma
pon05320  Autoimmune thyroid disease
pon05321  Inflammatory bowel disease
pon05322  Systemic lupus erythematosus
pon05323  Rheumatoid arthritis
pon05330  Allograft rejection
pon05332  Graft-versus-host disease
pon05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:pon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100443317
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100443317
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100443317
   04612 Antigen processing and presentation
    100443317
   04658 Th1 and Th2 cell differentiation
    100443317
   04659 Th17 cell differentiation
    100443317
   04672 Intestinal immune network for IgA production
    100443317
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100443317
   05164 Influenza A
    100443317
   05168 Herpes simplex virus 1 infection
    100443317
   05169 Epstein-Barr virus infection
    100443317
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100443317
   05152 Tuberculosis
    100443317
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100443317
   05140 Leishmaniasis
    100443317
  09163 Immune disease
   05310 Asthma
    100443317
   05322 Systemic lupus erythematosus
    100443317
   05323 Rheumatoid arthritis
    100443317
   05320 Autoimmune thyroid disease
    100443317
   05321 Inflammatory bowel disease
    100443317
   05330 Allograft rejection
    100443317
   05332 Graft-versus-host disease
    100443317
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100443317
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100443317
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pon04147]
    100443317
Exosome [BR:pon04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100443317
  Exosomal proteins of epithelial cells
   100443317
  Exosomal proteins of breast milk
   100443317
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 C2-set_2 Ig_2 SH3_YKFC_2nd
Other DBs
NCBI-GeneID: 100443317
NCBI-ProteinID: XP_002809164
UniProt: H2PL17
LinkDB
Position
5:32870142..32877061
AA seq 254 aa
MILNKALMLGALALTTVMSPCGGEDIVADHIASYGVNLYQSYGSFGQYTHEFDGDEQFYV
DLGRKETVWWLPVLSQFSFDPQFALTNIAVGKHNLNFLIKRSNSTAATNEVPEVTVFSKS
PVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFIIR
GLRSVGASRHQGPL
NT seq 765 nt   +upstreamnt  +downstreamnt
atgatcctaaacaaagctctgatgctgggggccctcgccctgaccaccgtgatgagcccc
tgtggaggtgaagacattgtggctgaccacatcgcctcttatggtgtaaacttgtaccag
tcttacggttcctttggccagtacacccatgaatttgatggagacgagcagttctacgtg
gacctggggaggaaggagactgtctggtggttgcctgttctcagccaatttagttttgac
ccgcaatttgcactgacaaacattgccgtgggaaaacataacttgaacttcctgattaaa
cgctccaactctactgctgctaccaatgaggttcctgaggttacagtgttttccaagtct
cccgtgacgctgggtcagcccaacaccctcatctgtcttgtggacaacatctttcctcct
gtggtcaacatcacatggctgagcaatgggcactcagtcacagaaggtgtttccgagacc
agcttcctctccaagagtgatcattccttcttcaagatcagttacctcaccttcctccct
tctgctgatgagatttatgactgcaaggtggagcactggggcctggaccagcctcttctg
aaacactgggagcctgagattccagcccctatgtcagagctcacagagactgtggtctgc
gccctggggttgtctgcaggcctcgtgggcattgtggtgggcactgtcttcatcatccga
ggcctgcgttcagttggtgcttccagacaccaagggcccttgtga

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