Pongo abelii (Sumatran orangutan): 100449432 Help Entry 100449432         CDS       T01416                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pon  Pongo abelii (Sumatran orangutan) Pathway pon04010   MAPK signaling pathway pon04064   NF-kappa B signaling pathway pon04120   Ubiquitin mediated proteolysis pon04140   Autophagy - animal pon04144   Endocytosis pon04380   Osteoclast differentiation pon04620   Toll-like receptor signaling pathway pon04621   NOD-like receptor signaling pathway pon04622   RIG-I-like receptor signaling pathway pon04657   IL-17 signaling pathway pon04722   Neurotrophin signaling pathway pon04936   Alcoholic liver disease pon05132   Salmonella infection pon05133   Pertussis pon05135   Yersinia infection pon05140   Leishmaniasis pon05142   Chagas disease pon05145   Toxoplasmosis pon05152   Tuberculosis pon05160   Hepatitis C pon05161   Hepatitis B pon05162   Measles pon05168   Herpes simplex virus 1 infection pon05169   Epstein-Barr virus infection pon05170   Human immunodeficiency virus 1 infection pon05171   Coronavirus disease - COVID-19 pon05200   Pathways in cancer pon05222   Small cell lung cancer pon05235   PD-L1 expression and PD-1 checkpoint pathway in cancer pon05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:pon00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100449432 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100449432 (TRAF6)    04064 NF-kappa B signaling pathway     100449432 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100449432 (TRAF6)    04140 Autophagy - animal     100449432 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100449432 (TRAF6)    04621 NOD-like receptor signaling pathway     100449432 (TRAF6)    04622 RIG-I-like receptor signaling pathway     100449432 (TRAF6)    04657 IL-17 signaling pathway     100449432 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     100449432 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     100449432 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100449432 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100449432 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     100449432 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100449432 (TRAF6)    05161 Hepatitis B     100449432 (TRAF6)    05160 Hepatitis C     100449432 (TRAF6)    05171 Coronavirus disease - COVID-19     100449432 (TRAF6)    05162 Measles     100449432 (TRAF6)    05168 Herpes simplex virus 1 infection     100449432 (TRAF6)    05169 Epstein-Barr virus infection     100449432 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100449432 (TRAF6)    05135 Yersinia infection     100449432 (TRAF6)    05133 Pertussis     100449432 (TRAF6)    05152 Tuberculosis     100449432 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100449432 (TRAF6)    05140 Leishmaniasis     100449432 (TRAF6)    05142 Chagas disease     100449432 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100449432 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     100449432 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pon04131]     100449432 (TRAF6)    04121 Ubiquitin system [BR:pon04121]     100449432 (TRAF6) Enzymes [BR:pon01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100449432 (TRAF6) Membrane trafficking [BR:pon04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100449432 (TRAF6) Ubiquitin system [BR:pon04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100449432 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Sina_ZnF TRAF3_RING RING_XB3-XBAT31 zf-RING_11 U-box Spc29 DM DUF16 DUF7310 AAA_13 EzrA PspA_IM30 DUF3450 Dynactin_p22 Filament Myosin_tail_1 DUF6271 FliJ UPF0242 Motif Other DBs NCBI-GeneID:  100449432 NCBI-ProteinID:  XP_002821919 Ensembl:  ENSPPYG00000003350 UniProt:  A0A2J8WFR2 LinkDB All DBs Position 9:30707511..30730188 Genome browser AA seq 522 aa AA seqDB search MSLLNCENSCGSSQSESDCCVAMASSCSAATKDDSVGGTASTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILK DCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPI PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYISEVRNFQETIH QLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNF GMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDS HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLE ALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV NT seq 1569 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt gtggccatggccagctcctgtagcgctgcaacaaaagatgatagtgtgggtggaactgcc agcacggggaacctctccagctcatttatggaggagatccagggatatgatgtagagttt gacccacccctggaaagcaaatatgaatgccccatctgcctgatggcattacgagaagca gtgcaaacgccatgcggccataggttctgcaaagcctgcatcataaaatcaataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttccagac aattttgcaaaacgtgagattctttctctgatggtgaagtgtccaaatgaaggttgtttg cacaagatggaactgagacatcttgaggatcatcaagcacattgtgagtttgctcttatg gattgtccccaatgccagcgtcctttccaaaaatttcatattaatattcacattctgaag gattgtccaaggagacaggtttcttgtgacaactgtgctgcatcaatggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatact atactcatcagagaacagatgcctaatcattatgatctagactgccctacagccccaatt ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc cacctacaagagaacacccagtcacacatgagaatgttggcccaggctgttcatagtttg agccttatacctgactctgggtatatctcagaggtccggaatttccaggaaactattcac cagttagagggtcgccttgtaagacaagaccatcaaatccgggagctgactgctaaaatg gaaactcagagtatgtatgtaagtgagctcaaacgaaccattcgaacccttgaggacaaa gttgctgaaatcgaagcacagcagtgcaatggaatttatatttggaagattggcaacttt ggaatgcatttgaaatgtcaagaagaggagaaacctgttgtgattcatagccctggattc tacactggcaaacccgggtacaaactgtgcatgcgcttgcaccttcagttaccgactgct cagcgctgtgcaaactatatatccctttttgtccacacaatgcaaggagaatatgacagc cacctcccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaagca cctgtaaggcaaaaccacgaagagataatggatgccaaaccagagctgcttgctttccag cgacccacaatcccacggaacccaaaaggctttggctatgtaacttttatgcatctggaa gccctaagacaaagaactttcattaaggatgacacattattagtgcgctgtgaggtctcc acccgctttgacatgggtagccttcggagggagggttttcagccacgaagtactgatgca ggggtatag

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