Pongo abelii (Sumatran orangutan): 100450057
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Entry
100450057 CDS
T01416
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X2
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pon04040
]
100450057 (SCN4A)
Ion channels [BR:
pon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100450057 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
100450057
NCBI-ProteinID:
XP_024090701
Ensembl:
ENSPPYG00000008537
UniProt:
H2NUF6
LinkDB
All DBs
Position
19:complement(79389667..79441522)
Genome browser
AA seq
1836 aa
AA seq
DB search
MARPSLCTLVPLGPECLRPFTRESLAAIEQRVVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPMIYGDPPPEVIGIPLEDLDPYYSNKKTFIVLNKGKAIFRFSATPALYLLSPFSVV
RRGAIKVLIHALFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKILARG
FCVDNFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYSNDTW
YGNDTWYGNEMWYGNDSWYANNAWNSHASWATNDTFDWDAYISDEGNFYFLEGSNDALLC
GNSSDAGHCPEGYECIKTGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAG
KTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDKEKEEEFQQMLEKFKKHQE
ELEKAKAAQALEGGEADGDPAHGKDCNGSLDTSQGKKGAPRQSGSGDSGISDAMEELEEA
HQKCPPWWYKCAHKVLIWNCCAPWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHY
PMTEHFDNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLA
NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIALDCNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLT
VFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEVNNLQIAIGRIKLGIGFAKAFL
LGLLHGKILSPKDIMLSLGEADGAGEAGEAEETAPEDEKKEPPEEDLKKDNHILNHMGLA
DGPPSSLELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDSKKPPQPLYDG
NSSVCSTADYKPPEEDPEEQAEENPEGEQPEECFTEACVQRWPCLYVDISQGRGKKWWTL
RRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIMEM
LLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDI
SEVNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKE
EQPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGKDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPQNKIQGMVYDLVTKQAFDITIMILICLNMVTMMVETDDQSQL
KVDILYNINMIFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKY
FVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFG
MSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPNLENP
GTSVKGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMF
YETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDIL
FALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRR
HLLQRSVKQASYMYRHSHDGSGDDAPEKEGLLANTMSKMYGQENGNSSLPSPEEKGEAGD
AGPTMGLMPISPSDTAWPPAPPPGQTVRPGVKESLV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggccagaccatctctgtgcaccctggtgcctctgggccctgagtgcttgcgccccttc
acccgggagtcactggcagccatagaacagcgggtggtggaggaggaggcccggctgcag
cggaacaagcagatggagatcgaggagcccgaacggaagccacgaagtgacttggaggct
ggcaagaacctacccatgatctacggagaccccccgccggaggtcatcggcatccccctg
gaggacctggatccctactacagcaataagaagaccttcatcgtactcaacaagggcaag
gccatcttccgcttctctgccacacctgctctctacctgctgagccccttcagtgtggtc
aggcgcggggccatcaaggtgctcatccacgcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtattcatgaccatgagtgacccgcctccctggtccaagaatgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatactggcccgaggc
ttctgtgtcgacaacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcatgatggcgtacttgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgggtgctgcgggccctcaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcactgtcttctgc
ctgagcgtctttgcgctggtgggattgcagctcttcatgggaaacctgaggcagaagtgt
gtgcgctggcccccgccgttcaatgacaccaacaccacgtggtacagcaatgacacgtgg
tatggcaatgacacatggtacggcaatgagatgtggtacggcaatgactcatggtatgcc
aacaacgcgtggaacagccatgcaagctgggccaccaacgatacctttgattgggatgcc
tacatcagtgatgaagggaacttctacttcctggagggctccaacgatgccctgctctgt
gggaacagcagtgatgctgggcactgccccgagggttatgagtgcatcaagactgggcgg
aaccccaattatggctacaccagctacgacaccttcagctgggccttcctggctctcttc
cgcctcatgacacaggactattgggagaacctcttccagctgacccttcgagcagctggc
aagacctacatgatcttcttcgtggtcatcatcttcctgggctctttctacctcatcaat
ctgatcctggccgtggtggccatggcatatgccgaacagaacgaggccaccctggccgag
gataaggagaaagaggaggagtttcagcagatgcttgagaagttcaaaaagcaccaggag
gagctggagaaggccaaggccgcccaagctctggaaggtggggaggcagatggggaccca
gcccatggcaaagactgcaatggcagcctggacacatcgcaagggaagaagggagctccg
aggcagagcggcagcggagacagcggcatctccgacgccatggaagaactggaagaggcc
caccagaagtgcccaccatggtggtacaagtgcgcccacaaagtgctcatatggaactgc
tgcgccccgtggctgaagttcaagaacatcatccacctgatcgtcatggacccgttcgtg
gacctgggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggaacattac
cccatgacggagcactttgacaacgtgctcactgtgggcaacctggtcttcacaggcatc
ttcacagcagagatggttctgaagctgatcgccatggacccctacgagtatttccagcag
ggttggaatatcttcgacagcatcatcgtcaccctcagcctggtagagctaggcctggcc
aacgtacagggactgtctgtgctacgctccttccgtctgctgcgcgtcttcaagctggcc
aagtcgtggccaacgctgaacatgctcatcaagatcattggcaattcagtgggggcactg
ggtaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcag
ctgttcggcaagagctacaaggagtgcgtgtgcaagatcgccttggactgcaacctgccg
cgctggcacatgcacgatttcttccactccttcctcatcgtcttccgcatcctgtgcggg
gagtggatcgagaccatgtgggactgcatggaggtggctggccaagccatgtgcctcacc
gtcttcctcatggtcatggtcatcggcaacctcgtggtcctgaacctgttcctggctctg
ctgctgagctccttcagcgccgacagtctggcagcctcagatgaggatggtgaggtgaac
aacctgcagattgccatcgggcgcatcaagttgggcatcggctttgccaaggccttcctc
ctggggctgctgcatggcaagatcctaagccccaaggacatcatgctcagcctcggggag
gctgatggggccggggaggctggagaagcagaggagactgcccccgaggatgagaagaag
gagccgcccgaggaggacctgaagaaggacaatcacatcctgaaccacatgggcctggct
gacggccccccatccagccttgagctggaccaccttaacttcatcaacaacccctacctg
accatacaggtgcccatcgcctccgaggagtccgacctggagatgcccaccgaggaggaa
accgacactttctcggagcctgaggatagcaagaaaccgccgcagcctctctatgatggg
aactcgtccgtctgcagcacagctgactacaagccccctgaggaggaccctgaggagcag
gcagaggagaaccccgagggggagcagcctgaggagtgcttcaccgaggcctgcgtgcag
cgctggccctgcctctacgtggacatctcccagggccgcgggaagaagtggtggactctg
cgcagggcctgcttcaagatcgtcgagcacaattggttcgagaccttcattgttttcatg
atcctgctcagcagtggggctctggccttcgaggacatctacattgagcagcgtcgagtc
atccgcaccatcctcgaatatgctgacaaggtcttcacctacatcttcatcatggagatg
ctgctcaaatgggtggcctacggctttaaggtgtacttcaccaatgcctggtgctggctt
gacttcctcatcgtggacgtctccatcatcagcttggtggccaactggctgggctactcg
gagctgggacccatcaaatccctgcggacactgcgggccctgcgtcccctgagggcactg
tcccgattcgagggcatgagggtggtggtgaacgccctcctgggcgccatcccctccatc
atgaacgtgctgctcgtctgcctcatcttctggctaatcttcagcatcatgggtgtcaac
ctgtttgccggcaagttctactactgcatcaacaccaccacctctgagaggttcgacatc
tccgaggtcaacaacaagtctgagtgcgagagcctcatgcacacgggccaggtccgctgg
ctcaatgtcaaggtcaactacgacaacgtgggtctgggctacctctccctcctgcaggtg
gccaccttcaagggttggatggacatcatgtatgcagccgtggactcccgggagaaggag
gagcagccgcagtacgaggtgaacctctacatgtacctctactttgtcatcttcatcatc
tttggctccttcttcaccctcaacctcttcattggcgtcatcattgacaacttcaaccag
cagaagaagaagttaggagggaaagacatctttatgacggaggaacagaagaaatactat
aacgccatgaagaagcttggctccaagaagcctcagaagccaattccccggccccagaac
aagatccagggcatggtgtatgacctcgtgacaaagcaggccttcgacatcaccatcatg
atcctcatctgcctcaacatggtcaccatgatggtggagacagacgaccagagccagctc
aaggtggacatcctgtacaacatcaacatgatctttatcatcatcttcactggggagtgc
gtgctcaagatgctcgccctgcgccagtactacttcaccgtcggctggaacatcttcgac
ttcgtggtcgtcatcctgtccattgtgggccttgcgctctctgacctgatccagaagtac
ttcgtgtcacccacgctgttccgtgtgatccgcctggcacggatcgggcgtgtcctgcgg
ctgatccgcggggccaagggcatccggacgctgctgttcgccctcatgatgtcgctgcct
gccctcttcaacatcggcctcctcctcttcctagtcatgttcatctactccatcttcggc
atgtccaactttgcctacgtcaagaaggagtcgggcatcgatgatatgttcaacttcgag
accttcggcaacagcatcatctgcctgttcgagatcaccacatcggctggctgggacggg
ctcctcaaccccatcctcaacagcgggcccccggactgtgaccccaacctggagaaccca
ggcaccagtgtcaagggtgactgcggcaacccctccatcggcatctgcttcttctgcagc
tatatcatcatctctttcctcatcgtggtcaacatgtacatagccatcatcctggagaac
ttcaatgtggccacagaggagagcagcgagccccttggtgaggatgactttgagatgttc
tatgagacgtgggagaagttcgaccccgacgccacccagttcatcgcctacagccgcctc
tctgacttcgtggacaccctgcaggaaccgctgaggatagccaagcccaacaagatcaag
ctcatcacgctggacttgcccatggtgccgggggacaagatccactgcctggacatcctc
tttgccctgaccaaagaggtcctgggtgactctggggaaatggacgccctcaaacagacc
atggaggagaagttcatggcggccaacccctccaaggtgtcctacgagcccatcaccacc
accctcaagaggaagcacgaggaggtgtgcgccatcaagatccagagggcctaccgccgg
cacctgctacagcgctccgtgaagcaggcatcctacatgtaccgccacagccacgacggc
agtggggacgatgcccctgagaaggaggggctgcttgccaacaccatgagcaagatgtat
ggccaggagaatgggaacagcagcttgccgagcccggaggagaagggcgaggcaggggac
gccggacccactatggggctgatgcccatcagcccctcagacactgcctggcctcccgcc
cctcccccagggcagacggtgcgcccaggggtcaaggagtctcttgtctag
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