Pongo abelii (Sumatran orangutan): 100454158
Help
Entry
100454158 CDS
T01416
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04360
Axon guidance
pon05017
Spinocerebellar ataxia
pon05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100454158 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100454158 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
100454158 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pon04040
]
100454158 (TRPC3)
Ion channels [BR:
pon04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100454158 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
100454158
NCBI-ProteinID:
XP_002815158
Ensembl:
ENSPPYG00000015040
UniProt:
H2PE86
LinkDB
All DBs
Position
3:complement(143415452..143489141)
Genome browser
AA seq
921 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEDEGEDEGAEPQRRRRGWRGVNGGLEPRSAPSQREPHG
YCPPPFSHGPDLSMEGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAA
EYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALL
LAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILA
AHCQKYEVVHMLLMKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYL
SLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAIL
NGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIA
IKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDR
FEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQ
LWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARD
KWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMV
FFAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIG
YVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPF
SLVPSPKSFVYFIMRIVNFPKCRRRRLQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFNS
ILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATE
ELAILIHKLSEKLNPSMLRCE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggaacaagcaagggtgaccttccccgcgccggag
gaggaggaagacgagggcgaggacgagggcgcggagccgcagcgccgccgccggggctgg
aggggcgtcaacggggggctggagccgcgctcggcgccctcgcaacgggagccgcacggc
tactgcccgccgcccttctcccacgggccggacctgtccatggagggaagcccatccctg
agacgcatgacggtgatgcgggagaagggccggcgccaggctgtcaggggcccggccttc
atgttcaatgaccgcggcaccagcctcaccgcggaggaggagcgcttcctcgacgccgcc
gagtacggcaacatcccagtggtgcgcaagatgctggaggagtccaagacgctgaacgtc
aactgcgtggactacatgggccagaacgcgctgcagctggctgtgggcaacgagcacctg
gaggtgaccgagctgctgctcaagaaggagaacctggcgcgtattggcgacgccctgctg
ctcgccatcagcaagggctacgtgcgcatcgtagaggccatcctcaaccaccctggcttc
gcggccagcaagcgcctcactctgagcccctgcgagcaggagctgcaggacgacgacttc
tacgcttacgacgaggacggcacgcgcttctcgccggacatcacccccatcatcctggcg
gcgcactgccagaaatacgaagtggtgcacatgctgctgatgaagggtgccaggatcgag
cggccgcacgactatttctgcaagtgcggggactgcacggagaagcagaggcacgactcc
ttcagccactcacgctcgaggatcaatgcctacaaggggctggccagcccggcctacctc
tcattgtccagcgaggacccggtgcttacggccctagagctcagcaacgagctggccaag
ctggccaacatagagaaggagttcaagaatgactatcggaagctctccatgcaatgcaaa
gactttgtagtgggtgtgctggatctctgccgagactcagaagaggtagaagccattctg
aatggagatctggaatcagcagagcctctggaggtacacaggcacaaagcttcattaagt
cgtgtgaaacttgccattaagtatgaagtcaaaaagtttgtggctcatcccaactgccag
cagcagctcttgacgatctggtatgagaacctctcaggcctaagggagcagaccatagcg
atcaagtgtctcgttgtgctggtcgtggccctgggccttccattcctggccattggctac
tggatcgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagtttgta
gcacacgcagcttctttcatcatcttcctgggtctgcttgtgttcaatgcctcagacagg
ttcgaaggcatcaccacgctgcccaatatcacagttattgactatcccaaacagatcttc
agggtgaaaaccacccagtttacatggactgaaatgctaattatggtctgggttcttgga
atgatgtggtctgagtgtaaagagctctggctggaaggacctagggaatacattttgcag
ttgtggaatgtgctcgactttgggatgctctccatcttcattgctgctttcacagccaga
ttcctagctttccttcaggcaacaaaggcacaacagtatgtggacagttacgtccaagag
agtgacctcagtgaagtgacactcccaccagagatacagtatttcacttacgctagagat
aaatggctcccttctgaccctcagattatatctgaaggcctttatgccatagctgtcgtg
ctcagcttctctcggattgcgtacatcctccctgcaaatgagagctttggccccctgcag
atctctcttggaaggactgtaaaggacatattcaagttcatggtcctctttattatggtg
ttttttgcctttatgattggcatgttcatactttattcttactaccttggggctaaagta
aatgctgcttttaccactgtagaagaaagtttcaagactttattttggtcaatatttggg
ttgtctgaagtgacttccgttgtgctcaaatatgatcacaaattcatagaaaatattgga
tacgttctttatggaatatacaatgtaactatggtggtcgttttactcaacatgctaatt
gctatgattaatagctcatatcaagaaattgaggatgacagtgatgtagaatggaagttt
gctcgttcaaaactttggttatcctattttgatgatggaaaaacattacctccacctttc
agtctagttcctagtccaaaatcctttgtttatttcatcatgcgaatcgttaactttccc
aaatgcagaaggagaaggcttcagaaggatatagaaatgggaatgggtaactcaaagtcc
aggttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagc
attctcaatcagccaacacgttatcagcagataatgaaaagacttataaagcggtatgtt
ttgaaagcacaagtagacaaagaaaatgatgaagttaatgaaggtgaattaaaagaaatc
aagcaagatatctccagccttcgttatgaacttttggaagacaagagccaagcaactgag
gaattagccattctaattcataaacttagtgagaaactgaatcccagcatgctgagatgt
gaatga
DBGET
integrated database retrieval system
