KEGG   Pongo abelii (Sumatran orangutan): 129047336
Entry
129047336         CDS       T01416                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F isoform X3
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03250  Viral life cycle - HIV-1
pon05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129047336
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    129047336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    129047336
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129047336
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC_C APOBEC3 APOBEC4_like APOBEC4 APOBEC1 AID dCMP_cyt_deam_1 Toxin-deaminase DUF7136
Other DBs
NCBI-GeneID: 129047336
NCBI-ProteinID: XP_024095461
LinkDB
Position
23:45524956..45540311
AA seq 373 aa
MNPQFRNTVERMYRGTFFYNFNNRPILSRRNTVWLCYKVKTKGPSRPPLNAKIFRGQVYF
EPPYHAEMCFLSWFCGNQLPAYKRFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTVSTA
RLYYYWERDYRGALRRLRQAGAHVKIMDYEDFAYCWENFVYNEGQPFMPWYKFDANYAFL
HHTLKEILRNPMEATYPHIFYFHFKNLRKAYGRNESWLCFTVEVTKHHSPVSWKRGVFRN
QVDPETHCHAEMCFLSWFCDNTLSPNTNYRVTWYTSWSPCPECAGKVAKFLARHSNVNLT
VFTARLYYFWDTDYQQGLRSLSQEGASVGIMKYKHFKYCWENFVYNDHEPFKPWKGLKRN
FLFLDSKLQEILK
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaatcctcagttcagaaacacagtggagcgaatgtatcgaggcacattcttctacaac
tttaataatagacccatcctttctcgtcggaataccgtctggctgtgctacaaagtgaaa
acaaagggtccctcaaggccccctttgaacgcaaagatctttcgaggccaggtgtatttc
gagcctccgtaccacgcagaaatgtgcttcctctcttggttctgtggcaaccagctgcct
gcttacaagcgcttccagatcacctggtttgtatcctggaccccctgcccggactgtgtg
gcgaagctggccgaattcctggctgagcaccccaatgtcaccctgaccgtctccaccgcc
cgcctgtactactactgggaaagagattaccgaggggcgctccgcaggctgcgtcaggca
ggggcccacgtgaagatcatggactatgaagactttgcatactgctgggaaaactttgtg
tacaatgaaggtcagccattcatgccttggtacaaattcgatgccaattatgcattcctg
caccacacgctaaaggagattctcagaaacccgatggaggcaacatatccacacatattc
tacttccactttaaaaacctacgcaaagcctatggtcggaacgaaagctggctgtgcttc
accgtggaagttacaaagcaccactcacctgtctcctggaagaggggcgtcttccgaaac
caggtggatcctgagacccattgtcatgcagaaatgtgcttcctctcttggttctgtgac
aacacactgtctcctaacacaaactaccgagtcacctggtacacgtcttggagcccttgc
ccagagtgtgcagggaaggtggccaagttcctggccaggcacagcaacgtgaatctcacc
gtcttcaccgcccgcctttactatttctgggatacagattaccagcaggggctccgcagc
ctgagtcaggaaggggcctccgtggggatcatgaaatacaaacattttaaatattgttgg
gaaaactttgtgtacaatgatcatgaaccattcaagccttggaagggactaaaacgcaac
tttctattcctggacagcaagctgcaggagattctcaagtga

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