Candidatus Ponderosibacter sp. Uisw_141_02: ABXT40_11570
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Entry
ABXT40_11570 CDS
T11339
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pond Candidatus Ponderosibacter sp. Uisw_141_02
Pathway
pond03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pond00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABXT40_11570 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pond03400
]
ABXT40_11570 (nth)
Enzymes [BR:
pond01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABXT40_11570 (nth)
DNA repair and recombination proteins [BR:
pond03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABXT40_11570 (nth)
Prokaryotic type
ABXT40_11570 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XOJ56333
LinkDB
All DBs
Position
2349931..2350575
Genome browser
AA seq
214 aa
AA seq
DB search
MPVKMKLAAIDICFERLSQRQPDPQTELDFTDAFTLLVAVVLSAQATDVGVNKATKGLFA
AANTPAAMVALGSDGISHHIRTIGLFNTKAKNVFKLSQILLDKHDCEVPQDRAALEALPG
VGRKTANVVLNEAFGEPTIAVDTHIFRFGNRTGMAPGKTPDAVEKELLRRVPDRWKKGAH
HWMILHGRYVCKARKPDCADCVIADLCLFKAKTL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgccggtaaaaatgaaacttgcggcaattgatatttgctttgaacgcttgtcgcaacgc
caacctgatccacaaaccgaacttgattttaccgatgcttttacgcttcttgtggcggtt
gttctctcagcgcaggcaaccgatgttggagtgaataaagcaaccaaaggcctgtttgcc
gccgccaatacaccagcggcaatggtggcgctcggcagtgacgggatcagtcatcatatc
cgcacgattggcctgtttaataccaaggccaagaatgtatttaaattatcgcaaattctg
cttgataagcatgattgcgaggtaccgcaggatcgtgccgcgcttgaggcattgcccggg
gttgggcggaaaacggcaaatgtggttttgaatgaagcatttggcgagccaacaatcgcc
gttgatacgcatatttttcgctttggcaatcgcaccggcatggcacccggaaaaacccct
gatgcggttgaaaaggaattgcttcgccgtgtgcctgaccgctggaaaaaaggcgcgcat
cactggatgattctccatgggcgttatgtctgcaaggcgcgcaaacctgattgtgccgat
tgtgtgattgccgatttatgccttttcaaagccaagactttatag
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