Populus trichocarpa (black cottonwood): 18094717
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Entry
18094717 CDS
T01077
Name
(RefSeq) linoleate 13S-lipoxygenase 3-1, chloroplastic
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00591
Linoleic acid metabolism
pop00592
alpha-Linolenic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
18094717
00592 alpha-Linolenic acid metabolism
18094717
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
18094717
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
18094717
NCBI-ProteinID:
XP_006369132
UniProt:
U5GTE9
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Position
1:14304192..14310140
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AA seq
923 aa
AA seq
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MALATEIIGGRLIDGSSFLPTSKMLTNQRVGMVKRNQFLGSPVLVPSQQIRRQEQLKRAV
RAPVAAISEDIIKTNNKTTVPEKAVNFKVRAVVTVRNKHKEDLKATIVKQLDSFTDKIGR
NVVLELISTDVDPKSKEPKRSKPAALRDWSKKSNLKAERVHYTAEFTVDSNFGVPGAITV
SNKHQQEFFMESITIEGFACGPVHFPCNSWIQSKKDHPGKRILFSNKPYLPSETPAGLRA
LREKELRDLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSVNLTRPSLGGKKIPFPRRCRTG
RLPMDSDITAESRVEKPLPLYVPRDEQFEESKKNTFSAGRLKSVLHNIIPSLKATISAEN
HDFSGFSDIDILYKEGLLLKVGLQDEIWKNLPLPKVVTKIQESSEGLLKYDTPKILSRDK
FAWLRDDEFARQAVSGVNPVSIESLKVFPPKSNLDPEIYGPQESAFKEEHILGHLNGLSV
SQALEENKLFIIDYHDAYLPFLDRINALDGRKAYATRTMFFLTPLGTLKPIAIELSLPPA
GPNSRSKRVVTPPMDATSNWVWQLAKAHVCSNDAGVHQLVNHWLRTHASLEPFILAAHRQ
MSAMHPIFKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEISAAAYKSSWRF
DKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAQDGLLIWSAIENWVRTYVERYYPDS
SLVCNDKELQAWYSESINVGHFDLRDADWWPKLETTDDLVSILTTIIWLASAQHAALNFG
QYPYGGYVPNRPPLMRRLIPEENDPEYANFLADPQKYYLLALPSLLQATKFMAVVDILST
HSPDEEYIGERQQPSIWSGDAEIIEAFYEFSAEIQQIEKEIDRRNADPRLKHRCGAGVLP
YELLAPSSGPGVTCRGVPNSVSI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcactagctacagaaatcattgggggtcgtttgattgatggatcatcatttttacca
acgtcaaaaatgttgacgaaccaaagggtaggaatggttaagaggaaccagttcttgggg
agtccagttttggtgccttcgcaacaaattagaagacaggagcagttaaagagagccgtg
agggctcctgtggcagctattagtgaagatataattaagaccaacaacaaaactactgtg
cctgaaaaggcagtgaatttcaaggtgagagctgtggtgactgtgagaaacaagcacaag
gaggacttgaaggcgactattgtgaagcagttggattctttcactgacaagattgggaga
aatgttgttttggagcttattagcactgatgttgatccaaaaagcaaggaaccaaagagg
agcaagccagctgcgttgagagactggtcaaagaaatcaaatcttaaagctgagagggtc
cattacactgctgaatttacagttgactcaaatttcggtgtgcctggggcaatcacagtg
agcaacaagcatcaacaggagtttttcatggagagtatcaccattgaaggttttgcttgt
ggtccagtccatttcccttgcaactcatggatacaatctaagaaagatcatcctgggaag
agaattcttttctctaataagccatatttaccaagtgagacaccagctgggcttcgagca
ttgagagagaaggaactgagggatcttaggggcgatggaaaaggagttagaaaattgtca
gataggatttacgacttcgatgtgtacaatgatttgggaaatccagacaagagcgttaac
ttgactagaccaagtcttggcggtaaaaaaatcccattcccaagacgatgccgtactggt
cgcctcccaatggactctgatatcactgcagagagccgagtggagaagccattgccacta
tacgtgcctagagatgaacaatttgaggagtctaagaaaaacactttctcagctgggagg
cttaaatcagtgcttcataacataataccatccctcaaggcaaccatttctgctgaaaat
catgacttcagtggcttctcagacattgatattctctacaaagaagggcttcttcttaaa
gtagggttgcaagatgaaatctggaagaacctaccattgcccaaagtggttactaagata
caagaatctagtgagggattgctcaaatatgacacgccaaagatcctttccagggacaag
tttgcctggttgagagacgacgaatttgctcgtcaagccgtctcaggagttaacccagtt
agcattgagagcctcaaggtttttccaccaaaaagcaatcttgatcctgaaatttacggt
ccgcaagaatccgctttcaaggaggaacacattctgggccatcttaatggcttgtccgtt
tcgcaggccttggaggaaaacaaactgtttataattgattaccatgatgcttatctccca
tttttggaccggattaatgcccttgatggtagaaaagcgtatgcaactcgtaccatgttt
ttcttgacgcctcttgggacacttaagcccatcgctatagagcttagcctcccaccagcg
gggccaaattcccgatcaaagcgtgtggttacacctcctatggatgcaactagcaattgg
gtttggcaactcgctaaggctcatgtttgctccaacgatgctggtgttcaccagcttgtc
aatcactggttacgtacacatgcttccctggagccatttatactagcagcgcacaggcaa
atgagtgcaatgcatcctattttcaaacttttggatccacacatgagatatacactagag
atcaatgccttagcccgccaaaacttaatcaatgctgatggtgttattgagtcttgcttc
actcccggccgctattgtatggagatcagcgcagctgcctacaaaagctcttggcgtttt
gacaaggaaggcctccctgccgatctcattcgcaggggtatggcagtacctgacccaaca
caaccacacggtctaaagcttctaattgaggactacccatatgcccaagatgggctacta
atctggtctgcaatcgagaactgggttcgcacctatgttgagcgttactacccagattca
agcttggtttgtaatgacaaggagctacaagcatggtattctgagtccatcaatgtaggt
catttcgatcttcgtgatgctgactggtggcccaagctggaaaccactgacgatcttgtc
tcgatcctcaccaccatcatctggcttgcatccgcacagcatgccgcgctcaattttggg
cagtacccctatggtggttatgtgcctaatagaccgcccctaatgagaagattaattccc
gaagaaaatgaccccgagtatgcaaatttcctggctgatccacaaaaatattacctattg
gcactgccaagtttattgcaagcaacaaaattcatggctgtggtggacatattatcaaca
cactcaccggacgaggagtacataggggaacgacaacagccgtcaatatggtcaggcgat
gctgaaataatcgaggcattttatgagttctcggcagagattcagcagatcgagaaggag
atagacagaaggaatgctgatcctcgccttaagcaccggtgtggtgcaggggtgctgcca
tatgaattactagcccctagttcaggacctggagttacatgtagaggtgtcccaaatagc
gtgtcaatataa
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