KEGG   Populus trichocarpa (black cottonwood): 18098370
Entry
18098370          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18098370
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18098370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    18098370
Spliceosome [BR:pop03041]
 Complex A
  U2 snRNP components
   U2 related factors
    18098370
 Complex B
    18098370
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    18098370
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet
Other DBs
NCBI-GeneID: 18098370
NCBI-ProteinID: XP_006385091
UniProt: A9PB17
LinkDB
Position
4:complement(23262845..23266992)
AA seq 287 aa
MQGEEVSIEELASNLSTYKEQLHQVRQLLVDDPGNSEYVDMEKELIEVIALTEELLETAK
QNEISGSHLGTGASASPGYAEPQEADQHEKFPIGSKVQAVWSEDGEWYDATVEDLTPNGY
YVTFDGWGNREEVDPDNVRPVEFNALLEAEKVAEATKQAIKRKIAQAASVDFQSRTLPAK
LRIEPDDSEDVKAAKRKKIHSFKSKMRFEQLEVAQNKRQNAWQQFQTTKGKTKKVGFFSG
RKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKDGSVEIDD
NT seq 864 nt   +upstreamnt  +downstreamnt
atgcaaggagaagaagtaagcatagaggagctcgcttctaatctctccacttacaaagaa
cagcttcaccaggtcagacagcttttggttgatgatcctggaaactctgaatatgtagac
atggagaaggagcttattgaggtcattgctctgacagaagaactccttgaaactgcaaag
cagaatgagatttctggatcacatcttggaacaggagctagcgcatctcctggttacgct
gaacctcaggaggctgatcaacatgagaagttccccatcggttcaaaagttcaagctgta
tggagtgaagatggggaatggtatgatgcaacggttgaggatcttactcctaatggatat
tatgtaacctttgatggatggggaaacagggaagaggtggaccctgacaatgtaaggcca
gttgaattcaatgccttactggaagcagaaaaagtagctgaagctacaaaacaagctatc
aaaagaaagattgcccaagcggcatctgttgactttcaatcacgaactttaccagcaaag
cttcggatagaacctgacgactcagaggatgtgaaagctgccaagcgtaagaagatacat
tctttcaagtcaaagatgcgttttgagcaacttgaagtcgcacagaataagcgacagaat
gcatggcagcagttccagacaactaaaggcaagactaagaaggttggtttcttctcaggg
cgcaagagagagagcattttcaaatctcctgatgatcccaatggcaaggttggtgtgact
ggaagtgggaagggcttgacagagttccagaagagggaaaagcacttgcatctcaaggat
ggaagcgttgagatcgatgattag

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