Populus trichocarpa (black cottonwood): 18100669
Help
Entry
18100669 CDS
T01077
Name
(RefSeq) tocopherol cyclase, chloroplastic
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Module
pop_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
18100669
Enzymes [BR:
pop01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
18100669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
18100669
NCBI-ProteinID:
XP_024460516
LinkDB
All DBs
Position
6:complement(24195545..24198716)
Genome browser
AA seq
300 aa
AA seq
DB search
MSRTSNCRTDYVKTVKIARWEYRTRPIYGWGSVGSKQNSTAGWLAAFPVFEPHWQICTAS
GLSTGWIEWEGERFEFKDDPSCSEKNWGGAFSRKLFWLQCNVFEGTKGEVTLTAAGGVRQ
LPGPAGSEIHENAALVKLEARAKDLGTPILAPACIDTCSGVLKLQMWEWRQDGTRGKVIL
KVTSDMAAVEVGGGPWFTNWKGKTSAPELLRRALRVPIDLDAVYNSVPFFKPPGLQSVGS
CFRSTKGISFSLLEIEKEIWQSVGGAVCMNLRISLAKCYGYHCYLRSKYISVALNIISKC
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaacttctaattgcaggacagattatgttaaaactgtgaaaattgctcgttgg
gagtacaggactcgtcccatttatggatggggtagcgttgggtctaaacaaaattctact
gcaggttggcttgctgcttttcctgtattcgagcctcattggcaaatatgcacggcaagc
gggctttcaacaggctggatagagtgggagggcgaaagatttgagttcaaagatgatcct
tcttgttcagaaaagaactggggtggagccttctcaagaaaattgttttggcttcagtgt
aatgtcttcgaaggtacaaaaggagaggttactttgacagcagctggtggagtgaggcag
ttgcctggaccagctggctctgagatacatgaaaatgctgcactggttaaattggaggca
agagcaaaggatttgggaacacctatacttgctccagcttgtatagatacatgttctggt
gttctgaaattgcaaatgtgggagtggagacaggacggaactaggggaaaggtaattttg
aaagttacgagtgacatggcagcagtggaagttggaggaggaccatggtttaccaattgg
aaaggcaagacatctgctccagagctccttagacgtgctcttcgagttcccattgatctg
gatgcagtttacaattctgttccattcttcaagccccccggtttacagtcagttggctca
tgctttcgttccaccaaaggaatctccttttcactacttgaaatagaaaaagaaatatgg
cagagtgtgggtggggcggtttgcatgaacctgaggatcagtctggccaaatgctatgga
tatcattgctatctaagaagcaaatatatatccgtggctttgaatataatctctaaatgt
tga
DBGET
integrated database retrieval system
