Populus trichocarpa (black cottonwood): 18104497
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Entry
18104497 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18104497
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18104497
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18104497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18104497
03009 Ribosome biogenesis [BR:
pop03009
]
18104497
Spliceosome [BR:
pop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
18104497
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
18104497
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
18104497
NCBI-ProteinID:
XP_006376334
UniProt:
A9PBI3
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Position
13:complement(12529197..12531317)
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AA seq
128 aa
AA seq
DB search
MTVEAVNPKAYPLADAQLSITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKTQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaggcagtgaatccaaaagcatacccgcttgcagatgcccagttgtcaata
acaatactggaccttgttcaacaagctgctaactacaagcaactcaagaaaggagccaat
gaagctactaagacacttaacagaggtatctctgagtttgttgtgatggctgctgatact
gaaccacttgagatccttctccatcttcctttgcttgctgaagacaagaatgtgccctat
gtatttgtaccttcaaagcaagcacttggccgagcatgtggtgtcacaaggcctgttatt
gcttgttctgtgacgacaaatgaggggagtcaattgaaaacccaaattcaacaactcaag
gatgccattgagaaacttttgatctga
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