Populus trichocarpa (black cottonwood): 18108079
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Entry
18108079 CDS
T01077
Name
(RefSeq) phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1
KO
K11808
phosphoribosylaminoimidazole carboxylase [EC:
4.1.1.21
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00230
Purine metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
18108079
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.21 phosphoribosylaminoimidazole carboxylase
18108079
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRC
ATP-grasp
RS_preATP-grasp-like
PurK_C
Dala_Dala_lig_C
2-Hacid_dh_C
Fe-ADH_2
Gp_dh_N
PurT_C
GARS_A
Motif
Other DBs
NCBI-GeneID:
18108079
NCBI-ProteinID:
XP_024446666
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Position
19:1705688..1712212
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AA seq
633 aa
AA seq
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MLLLQQTTLVPKLLLFSKSDFGFKPCSVSLSTRLSLMDKHTKSSSLKQFQSPVLACQAST
DTHDTSFRKDDLPVHGVSEVIVGVLGGGQLGRMLCQAASEMAIKVMVLDPLTNCPASAIA
YDHMVGSFDDSATVQEFAKRCGVLTVEIEHVDAATMEKLEQQGVDCQPKASTIRIIQDKY
LQKVHFSRHGIPLPDFMQIDDLEGAKRAGDLFGYPLMLKSKRLAYDGRGNAVAKSEDELS
SAVNALGGFDRGLYVEKWTSFVKELAVIVARGRDNSISCYPVVETIHKENICHVVKAPAD
IPWKIRKLATDVAHKAVSSLEGAGVFAVELFLTKDGQILLNEVAPRPHNSGHHTIESCYT
SQFEQHLRAVLGLPLGDPAMKTPAAIMYNILGEDEGEPGFHLAHQLIGRALNIQGASVHW
YDKPEMRKQRKMGHITIAGPSMGIVEAQLKSMLKEEGSESQTAVKPRVGIIMGSDSDLPI
MKDAARILTVFGVPHEVRIVSAHRTPEMMFSYALSAQDQGIQIIIAGAGGAAHLPGMVAS
LTPLPVIGVPVRASALDGMDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVGDTDL
LARMSQYQEDTRDDVLKKAEKLQTDGWETYLNP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgcaacagacaaccctagtacctaaactcctactgttttcaaaatctgat
ttcggtttcaagccttgttctgtttccctttcaacaagattatctttaatggacaaacac
accaagtcctcttcgctaaaacagtttcaaagtccagtcttggcttgtcaagcatcaact
gacactcacgatacttctttccggaaagatgacttgccagttcatggagtgtccgaggtg
attgttggggtattgggaggtgggcaattgggtcgtatgttatgccaagcagcttcagaa
atggctattaaagtcatggttttggacccattgactaattgtccagcgagtgcgattgca
tatgatcatatggttggaagctttgatgatagtgcaacagttcaggaattcgcaaaaaga
tgtggagtgttgactgtggagatcgaacatgttgatgctgctacaatggagaagcttgag
cagcaaggagttgattgccaaccgaaagcctccactattagaattatccaagataagtat
ctccagaaggttcatttttctcggcatgggattccccttcctgactttatgcagattgat
gatctagaaggtgccaagagagcaggcgacttatttggctatcctctaatgctcaagagc
aaaaggctagcttatgatgggcgtgggaatgcagttgctaagagtgaagatgagctttct
tctgctgtaaatgctcttggaggatttgatcgaggtttatatgttgagaaatggacatcc
tttgtgaaggagctagctgtcattgtggctagaggaagagacaattccatttcgtgctac
cctgttgttgaaactattcacaaggaaaacatttgtcacgtggttaaggctcctgctgat
ataccatggaagatcagaaaacttgccactgatgttgcacataaagctgttagctcatta
gaaggtgctggtgtgtttgcagtggagttgtttttgacaaaggatggtcagatcttactg
aatgaagtagctcccagacctcataatagtggtcatcacacaattgagtcctgctatacc
tcacaattcgaacagcatttgagagctgttctgggtcttccacttggtgatccagcaatg
aagactcctgctgctatcatgtacaatatactgggtgaagacgagggtgagcctggtttt
cacttagctcaccagttgattggaagagcattgaacatacaaggggcttctgtccattgg
tatgataaaccagaaatgcgaaagcaacggaagatgggccatatcactattgccggccct
tcaatgggcatagtggaagcacagttaaaatcaatgctgaaggaagaaggttctgagagt
cagactgctgttaaaccgcgtgttgggatcattatgggctctgattcagatcttcctata
atgaaggatgctgcaaggattttgactgtgtttggagtgcctcatgaggtgagaatagta
tcagcccatcgaactcctgaaatgatgttttcttatgcactgtctgctcaagaccaaggc
atccaaatcatcattgctggtgctggtggtgcagctcacttgccaggtatggtagcttcg
ctgacccccttgcctgttattggtgttcctgttcgtgcttctgctttggatggaatggat
tcactcttatcaattgtacagatgccaaggggagtacctgttgcaactgtggcaattaat
aatgccacaaatgcaggtttgctagcagtaaggatgttgggtgttggtgataccgacctt
ttggcaagaatgagccagtatcaagaagatacaagggacgatgtcttgaagaaggcagaa
aaactacaaacagatggttgggaaacttatttgaatccttga
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