Populus trichocarpa (black cottonwood): 7460544
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Entry
7460544 CDS
T01077
Name
(RefSeq) 4-coumarate--CoA ligase-like 1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00940
Phenylpropanoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7460544
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
7460544
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
7460544
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Motif
Pfam:
AMP-binding
AMP-binding_C
LysR_substrate
Motif
Other DBs
NCBI-GeneID:
7460544
NCBI-ProteinID:
XP_002297838
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All DBs
Position
1:4192839..4195762
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AA seq
593 aa
AA seq
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MSISYSHLSLNYCLIPCTRHDHKKFFTISPSFKTQLNSAALLHCLISTMGTPIPCSAQEE
HIFRSRHPAVLVPDITLPDFVLQDAELYADKVAFVEAATGKTFTYAEVVRDTRRFAKALR
SLGLRKGHVVVVALPNVAEYGIVALGIMAAGGVFSGANPTAHESELKKQAEAADAKLIVT
NDLNYGKVKGLGLPVIVLGEACISTAVNWNELLDAADRAGDTLAYEEVLQSDLCALPFSS
GTTGMSKGVMLTHRNLVANLCSSLFSVGPEMVGQVATLGLIPFFHIYGITGICCATLRNK
GKVVVMGRFELRTFLNALITQEVSFAPIVPPIILALVKNPIVEEFDLSKLKLKAIMTAAA
PLAPELLTAFENKFPGVQVQEAYGLTEHSCITLTHGDPSKGHGIAKKNSVGFLLPNLEIK
FINPENGQSLPENTPGEICVRSQCVMQGYYNNKEETARTIDADGWLHTGDIGYIDNDGDI
FIVDRIKELIKYKGFQVAPAELEAILFTHPSVEDAAVVPLPDEEAGEIPAACVVMSKGAK
ESEEDIMEFVASNVAHYKKVRVVQFVDSIPKSPSGKIMRRLLKEKMGTTSKAS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctcatactctcacctgtctcttaattactgtctaattccatgcacaagacat
gaccacaagaagttttttacgatttcaccttcctttaaaacacagcttaattctgctgcc
cttcttcactgtctcatatccaccatgggaactcccattccatgctcagcgcaagaggag
cacattttccgaagccgacatccggcggtcctggtgccagacatcacactccctgatttt
gtgctccaagatgctgaattgtatgctgacaaggtagcatttgtggaggctgcgacagga
aagacgtttacttacgctgaggtagttagagacactaggaggttcgctaaggccttgagg
tctctcggcctaagaaaaggacatgtggtggttgtagctctcccaaatgttgctgagtat
ggcattgtagcactaggaataatggctgctggcggtgtgttttcgggtgctaatcctact
gcacatgaatcagaacttaagaagcaggcggaggctgcagatgctaagcttattgtcaca
aatgaccttaattatggaaaggtgaagggtctagggctacctgtaatcgtactgggtgaa
gcatgcattagcactgccgtgaattggaatgaactgcttgatgcagctgaccgtgcaggc
gatacacttgcttatgaggaagtcctccagagtgatctatgtgcacttccattctcatca
ggcaccacagggatgtcaaagggtgtaatgctaacccatcggaatctggtggctaatttg
tgctccagtctcttcagtgtaggaccagaaatggtgggtcaggttgccacactaggccta
attccattctttcacatatatggtatcactggaatatgttgtgccacccttaggaacaag
gggaaagtagtggtgatgggtaggtttgaactcaggacatttctgaatgcattgatcaca
caagaggtcagttttgcaccaattgtgccaccaataattttagccttggttaagaatcca
atagtggaggaatttgatctcagcaagctcaaactcaaggctattatgacggcagcagct
ccactcgccccggagctgctcacagccttcgaaaacaagttccctggcgtccaggttcaa
gaggcatatggactgacagagcacagctgcatcacactcactcatggggatcctagtaaa
ggccatggcattgcaaagaaaaactcagtaggattcctccttccaaatttggaaatcaag
ttcatcaatcctgaaaacggtcaatctctccctgagaacacccctggtgaaatttgtgta
agaagccagtgtgttatgcaaggttactacaacaacaaggaggagaccgccaggaccatt
gacgctgatggatggctgcacactggtgacattgggtacatagacaacgatggagatatc
tttattgtggatcgcatcaaagaactaatcaagtacaagggttttcaagtagctcctgct
gagctagaggctatcctcttcacccatccctcagttgaagatgcagctgtcgtgccgttg
ccagatgaagaggcaggagagatcccagctgcttgtgttgtgatgagcaaaggtgccaaa
gaaagtgaagaagatataatggagtttgttgcctctaatgttgctcattacaagaaagtg
agagtggtgcaatttgtggacagcataccaaaatcaccttcagggaaaataatgcgaagg
cttcttaaagagaagatggggactacctccaaagctagctag
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