Populus trichocarpa (black cottonwood): 7462975
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Entry
7462975 CDS
T01077
Name
(RefSeq) GTP-binding nuclear protein Ran-3
KO
K07936
GTP-binding nuclear protein Ran
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
pop03013
Nucleocytoplasmic transport
pop03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
7462975
03008 Ribosome biogenesis in eukaryotes
7462975
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
7462975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7462975
03009 Ribosome biogenesis [BR:
pop03009
]
7462975
03016 Transfer RNA biogenesis [BR:
pop03016
]
7462975
03036 Chromosome and associated proteins [BR:
pop03036
]
7462975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7462975
04031 GTP-binding proteins [BR:
pop04031
]
7462975
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
7462975
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
7462975
Pre-60S particles
7462975
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
7462975
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
7462975
Spindle formation proteins
7462975
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7462975
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Ran Family
Ran
7462975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RNA_helicase
GTP_EFTU
Pox_A32
ATPase
AAA_24
ArgoMid
Septin
AAA_22
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
7462975
NCBI-ProteinID:
XP_002324281
UniProt:
A9PBY8
LinkDB
All DBs
Position
18:2280161..2283044
Genome browser
AA seq
221 aa
AA seq
DB search
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGNCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ETPALAPPEVPIDLVAQAQHEAELAAAASQPLPDDDDDAFE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggctttgccgaatcaacaaactgttgattatccaagcttcaagcttgtgattgttggc
gatggtggtacagggaaaacaacatttgtgaaaaggcatctgactggcgagttcgagaag
aaatatgagccaactattggtgtggaagttcatcctttggatttcttcactaactgtggt
aaaattagattctattgctgggatacagccggtcaagagaagtttggtggtcttagagat
ggatactacatccatggtaactgtgctataatcatgtttgatgttactgctcggttgaca
tacaagaatgttcctacatggcatagggatctttgcagggtctgcgaaaacattcctatt
gttctttgcggaaacaaggtggatgtaaagaacaggcaggtgaaggcaaagcaggttacc
tttcacaggaagaagaacctgcaatactatgagatttcagctaagagcaactataatttt
gagaagccattcttgtaccttgctagaaaacttgctggggatcctaacttgcattttgtt
gagactccagccttggctcccccagaagtgcctatcgatcttgtagcacaagcacagcat
gaagccgaacttgctgctgctgctagccaacctcttccagatgacgatgatgacgcgttt
gagtaa
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