Populus trichocarpa (black cottonwood): 7465079
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Entry
7465079 CDS
T01077
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
7465079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7465079
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
7465079
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
7465079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
7465079
NCBI-ProteinID:
XP_002300273
UniProt:
B9GIA0
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All DBs
Position
1:30534054..30541857
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AA seq
683 aa
AA seq
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MEKNETLSGDKPRPWQSYHTVYTNAKAGMEGVDKEKVQRIVYETSKGSKYFENEEKKEAL
LRQKIENMRAQSAKLSAADLSHYQTVADRRILELEAMRDLSRIWLHVDMDAFYAAVETLS
NPSLKGKPMAVGGLSMISTANYEARRFGVRAAMPGFIARKLCPELIFVPTDFKKYTHYSE
LTRKVFEKYDPNFMAASLDEAHLDITEVCKERGMSCGEIAEELRKCVNEETGLTCSAGVA
PNRLLAKVCSDINKPNGQFVLTNDRMAVMTFISSLPIRKIGGIGKVTEHILRDAFGISTC
EEMLQKGGLLCALFSHSTADFFLSVGLGIGKTDTPQVRSRKSISSERTFSATDDETLLYQ
KLADIAEMLCADMKKGGLCGRTLTLKLKTASFEVRSRAVTSEKYICSSEDILKYASKLLK
AELPISLRLMGLRLSHFNEDKIGAPSDPTQKTLNNFIVSGDLSRKNLDDPKSLGLDINDQ
HLMNNMEGSFSIESHELQHYGIRDPLASNNLEDLNVHHCTSTDSVEAEKIHEPSSNKIAD
KVITKDMAGEVSQWKESGLSLPGQLEGGSPDRMNQVIMHNEAVFSSEQKDELVWVDDYKC
SLCGIEMPPYFDEERQEHSDFHLAERLQKDESRIDSRTSALRQRSVQKDHISSQSKRKKR
KPSPKEGGHLSIDMFFAKSNLNF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaacgagaccttgtcaggagataaacctcgtccatggcaatcttaccacaca
gtttacactaacgctaaagcaggtatggaaggagtggacaaagagaaagtgcaaagaata
gtttatgaaaccagtaaaggatcaaagtattttgagaacgaggaaaaaaaggaggcttta
ttgaggcaaaaaattgaaaacatgcgtgcccaaagtgccaagcttagtgctgctgatctc
tctcattatcaaactgtggcagatagaagaattttagagctagaagccatgcgtgatctt
tcgaggatttggttacatgtggatatggatgctttctatgccgctgttgaaacattgagc
aatccttcattgaaagggaaaccgatggctgttggtggcttgtctatgatctcgaccgct
aattatgaggcacggaggtttggagttcgtgctgcaatgcctggtttcattgctcgtaaa
ttatgcccggagttaatttttgttcctacagatttcaagaagtatactcattacagtgaa
ttaactagaaaagtttttgagaaatacgatcctaatttcatggctgctagtttggatgaa
gcacacctggatataaccgaggtctgcaaagaaaggggcatgtcttgtggagaaattgcc
gaagaacttagaaaatgtgtcaacgaagagactggcctgacatgtagtgctggagtggcc
ccaaaccgcttacttgctaaggtttgctctgatataaataaacccaatggacagtttgtt
ttaacaaatgatcggatggctgtcatgacatttatatcctcactccccataaggaagatt
ggaggcattggtaaggttactgaacatatactgagggatgcttttggtattagtacatgt
gaagagatgctccagaagggcgggctcctctgtgcactgttttctcattccacagcagat
ttttttctctctgtgggtttggggattgggaagacagatacccctcaagtcaggtcccga
aaaagtatcagcagtgagagaactttttcagccacagatgatgagacacttctttatcag
aaattagctgatattgcagagatgctatgcgctgacatgaaaaaaggtggtctttgcggt
cgaacattgactctaaaattgaaaactgcatcatttgaggttcgaagcagagctgtgact
tcggaaaaatatatttgctcaagtgaagacatcttgaagtatgcttcaaagctgctaaag
gctgaacttcctatttctttaaggttgatgggcctacgcttgtctcatttcaatgaagac
aagattggtgccccatctgatccaacacaaaaaactctcaacaacttcatcgtgtcagga
gatttatctaggaaaaatttggatgatccaaaatccttgggattggatattaatgatcaa
cacttaatgaacaatatggaaggttccttttctattgagagtcatgagttacaacattat
ggaattagagatccactggccagcaataatctagaggatctgaatgttcaccactgcact
tccactgatagtgttgaagctgagaaaatccatgaaccttcaagcaacaaaattgcggac
aaggtgattaccaaggatatggcaggggaagtgtcacagtggaaggaatcaggcttgtcc
ttgcctggacagcttgaggggggaagccctgacagaatgaaccaggtcatcatgcacaat
gaggcagtcttttcatctgaacagaaagatgagttagtttgggtggatgactacaagtgc
tcgctgtgcgggattgaaatgccgccatattttgatgaagagagacaagagcactccgac
ttccatcttgcagagaggcttcaaaaggatgagtccagaattgactcaagaacttccgca
ctgaggcagaggtctgtccagaaggaccacatctcaagccaaagcaaacgtaagaagcgc
aagccatctccaaaagaaggcgggcatctttcaattgacatgttctttgctaagagcaat
ttgaatttctag
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