Populus trichocarpa (black cottonwood): 7465095
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Entry
7465095 CDS
T01077
Name
(RefSeq) transcription factor BOA
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7465095
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7465095
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Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
DUF7269
Motif
Other DBs
NCBI-GeneID:
7465095
NCBI-ProteinID:
XP_024450865
LinkDB
All DBs
Position
1:26128813..26132404
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AA seq
390 aa
AA seq
DB search
MGEEVKMSEYEINDEDNINRDDERIDVWEMGLPTPYDLTPLSQLLIPPELASAFNISPEP
HRTPLDVNRASQNTLSNLHGHLNALSSNNFKSFNETTGQTHDPMVVELEEEEEEEEEDVT
EAMDRDGSGSEARKLRRIDSEEADSALRTENWVDDPSSAAARTLKRPRLVWTPQLHKRFV
DVVGHLGMKNAVPKTIMQWMNVEGLTRENVASHLQKYRLYLKRKQGLSSEGPSASDQLFA
STPVPQSLHESGGGSCGGGNFGMPIPMPYHHPATTAGGMMPMPVYGHMGIQMVNDHVHNN
NNSNNYQHQQVSMNSHQNGYNGNVALLMGNKHVHNSSNKHQHQQVSTNSHQNGYNGNVAY
GHMFQQRDWNGTNYGPYSHHPHHAVSNDNM
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagtgaaaatgagtgaatacgaaatcaacgatgaagataacatcaacagg
gacgatgaaagaattgatgtgtgggagatgggattacctacaccttatgatctcactcct
ttatcacaactgttgatcccacctgaacttgcttccgccttcaacatctcccctgagcct
caccgtactccgctcgatgtcaaccgagcttcccagaacactctctccaatctccacggt
catttaaacgccctatcgtctaacaatttcaagtccttcaacgaaacgacaggtcaaacg
cacgaccctatggtagtcgagttagaggaggaggaggaggaggaggaggaggatgtgacc
gaggcgatggatcgggacgggtccggatccgaagcaaggaagttgaggaggattgattct
gaagaggcggattcagccttgaggactgagaactgggtggatgacccgtcatctgctgcg
gcgaggactttgaaacggccacggctggtgtggaccccgcagttgcataagagatttgtt
gatgtggtgggccacttagggatgaaaaacgcggtcccgaaaacaattatgcagtggatg
aatgtcgagggtttgactcgcgaaaatgtagctagtcatttgcaaaagtaccggctttat
ttgaagaggaaacaggggttgtcgagtgaaggaccctctgcttctgatcagttgtttgcg
tccactccagtgccgcagagtttgcacgagagcggcggcggaagctgtgggggtgggaat
ttcggaatgccaattccaatgccttatcatcatcccgccaccacggctggtgggatgatg
ccaatgccggtttatggacatatggggatccaaatggtgaatgatcatgttcataataat
aataatagcaataattatcagcatcagcaagttagtatgaatagtcatcaaaatgggtat
aatggaaatgttgctttgctaatggggaataagcatgttcataatagtagtaataagcat
cagcatcagcaagttagtacgaatagtcatcaaaatgggtataatggaaatgttgcttat
ggacatatgtttcagcagagggattggaatgggactaattatggtccatactcgcatcat
cctcatcatgcagtatctaatgataatatgtga
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