Populus trichocarpa (black cottonwood): 7465501
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Entry
7465501 CDS
T01077
Name
(RefSeq) 3-isopropylmalate dehydratase small subunit 1
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00290
Valine, leucine and isoleucine biosynthesis
pop00660
C5-Branched dibasic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01210
2-Oxocarboxylic acid metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
7465501
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
7465501
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
7465501
4.2.1.35 (R)-2-methylmalate dehydratase
7465501
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Motif
Pfam:
Aconitase_C
Aconitase_2_N
Motif
Other DBs
NCBI-GeneID:
7465501
NCBI-ProteinID:
XP_002303495
UniProt:
B9H074
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Position
3:13075235..13076503
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AA seq
255 aa
AA seq
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MAACRSTTTISLSRNPSFSTTNPKPSLSFLSPPCLKLPSILPSFKPLTSHAPPDQLLSIP
RATAAATPTTTPTTSFHGHCYVVGDNIDTDQIIPAEYLTLVPSKQEEYEKLGSYALIGLP
ATYKTRFIEANQTKTKYSIVIGGENFGCGSSREHAPVALGAAGAAAVVAESYARIFFRNS
VATGEIYPLESEVRICEECKTGDLITIELAESKLINHTSGKEYKLKPIGDAGPVIEAGGI
FAYARKTGMIPSQAP
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctgccgctctaccaccacaatctccctctccagaaaccctagtttctccacc
accaatcccaaaccttccctctctttcctctctcctccttgtctcaaactcccttccatt
ctcccctccttcaaacccctaacctcccacgccccacctgaccaacttctctccatccca
cgcgccacggccgccgccacccccaccaccacccccaccacttccttccacggccattgc
tatgtcgtcggcgacaacatcgacaccgatcaaattatccccgccgaataccttaccctt
gtcccttccaagcaagaggaatacgaaaaactcggatcctacgctttaatcggacttccg
gcgacttacaaaacccgattcatcgaagcgaaccaaacgaaaacgaaatactcgatcgtg
attgggggcgaaaattttgggtgcgggtcttcgcgtgaacacgcacctgtagcgcttggt
gcagcgggggcagctgcggttgttgcggaatcgtatgcgaggattttctttaggaattca
gttgcgacgggagagatatatccgcttgaatcggaagttaggatttgtgaagagtgtaag
actggtgatttgattacgattgaacttgcggaaagtaagttgattaaccatacgagtgga
aaggagtataagttgaagcctattggtgatgctggtcctgttatcgaagctggtggcatt
ttcgcttatgccaggaagaccggaatgattccttcccaagcaccatga
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