Populus trichocarpa (black cottonwood): 7465927
Help
Entry
7465927 CDS
T01077
Name
(RefSeq) probable DNA helicase MCM9
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7465927
03400 DNA repair and recombination proteins [BR:
pop03400
]
7465927
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
7465927
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
7465927
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
7465927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
MCM_N
Sigma54_activat
AAA_16
AAA_22
FtsK_SpoIIIE
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
7465927
NCBI-ProteinID:
XP_024448156
LinkDB
All DBs
Position
19:complement(2439738..2451895)
Genome browser
AA seq
673 aa
AA seq
DB search
MKPVNESESMEKEEDSEVKSLAEFLMTHHSEQLHSIVVSPDPKLHYPLYIDFTDLLNDNS
RLAHLVLAQPTVYLLLFDRAAFWAHKIVIKGLKFGEKGVEKKFIHVRINVCGSPLECPET
FPSIGRVRVKHRGILLTLKGTLIRSGAIKMYEGERMYQCRKCKHVFPVHPELESRNSITL
PSFCPSQRSKSCEGTRFDCVDESVIRHDYQEIKIQESTQVLGVGVIPRSIPVILMDDLVD
IVKTGDDIIVTGILTAKWSPDLKDVRSNLDPVLIANYVRRTNELKADIDIPNDVIMKFKQ
FWSDFNDTPLKGRNAILRGLCPQIFGLFTVKLAVTLTLIGGVQHVDASGSKIRGESHLLL
VGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGL
CCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGQYDPDQSLS
VNTALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILNEGESNKGDHDEDLGNIWTFSMLR
RYIHFVKGYFRPVLTKEAEKVISSYYQLQRRSATYNAARTTVRMLESLIRLAQAHARLMF
RNEVTRIDAIMAILCIESSMTTSAIVDSVGNSLHSNFTENPDEEYAKQEGLILEKLRSFD
EFSDVNIIEGLSR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggtcaatgaatccgaaagcatggagaaggaagaagacagtgaagtgaagtcc
ttagctgagtttctgatgacccatcactctgaacagcttcattccatagtcgtctctcca
gaccctaagcttcattaccctctctacatcgattttacagatttgctgaacgataattct
cgacttgctcatcttgttttggctcagccaactgtgtacttgctgcttttcgaccgggct
gccttctgggctcataaaattgtgatcaagggtttgaaatttggggagaaaggggttgag
aagaagttcattcatgtgcggattaatgtatgtggatctccacttgaatgccctgagacg
tttccgagcattgggcgtgtgagagtgaagcatcgcgggattcttctcactcttaagggg
actttaatcaggtctggagcgattaagatgtatgaaggggaaaggatgtatcagtgtcgg
aaatgcaagcatgttttcccggttcaccctgagttggaaagtagaaactccataacacta
ccttcgttttgcccttctcagaggtctaaatcctgtgaaggcacgaggttcgactgtgtc
gatgaatctgtaatacgccatgattaccaggaaatcaaaatccaagagagcacacaggtg
ttgggtgttggggtcattcctcggtcaattcctgttattctcatggatgatcttgttgac
attgtaaaaacaggagatgatatcattgttactgggattttgactgcaaaatggtctcct
gatttaaaagatgttcgatccaatcttgatcctgtattaattgctaattatgtgaggaga
actaacgagctgaaagcagatattgacatccccaatgatgttataatgaaattcaagcag
ttctggtcagatttcaatgatactcctttgaaagggagaaatgccattctgcgaggtctc
tgcccccaaatttttggactcttcactgtgaagcttgctgttacattaacacttattgga
ggggtgcaacatgttgatgcttctggttcaaagattcgaggagagtctcatttgcttttg
gttggtgatccaggtacggggaagtctcagttcttaaaatttgctgcaaagctgagcaac
cggtctgttatcactactgggttggggagtactagtgcaggattaactgtcactgcagtc
aaggatggaggggagtggatgttggaagctggagcccttgttctggcagatggagggctt
tgttgcattgatgaatttgacagcatgagggagcatgacagggcaacgatacatgaagca
atggagcaacagactataagtgttgctaaggctggtcttgttactactttaagtactagg
acaattgtctttggtgcaacaaatcccaaaggacagtatgaccctgatcaatctctctct
gtcaacactgcactctcgggaccgttattgagcagatttgacattgttttggtcctcttg
gatacgaagaatcctgaatgggatgctgttgtatcgtctcacattctcaatgagggtgaa
tcaaacaaaggagatcatgatgaagatttgggtaatatctggacattttctatgcttcgc
aggtatattcattttgttaaggggtacttcaggcctgtgcttaccaaggaagctgaaaag
gttatttcaagttattatcaactccaacgaagatctgcaacttataatgcagccaggact
accgtgcgcatgctggaaagtttgatacgcctagctcaagcacatgcaagacttatgttc
agaaatgaggtcactcggatagatgccattatggcaattttatgtatcgaatcatctatg
actacatcagccattgttgacagtgttgggaattccctgcactcaaatttcacagaaaat
cctgatgaagaatatgccaagcaggagggactaatacttgaaaagttgagatcgtttgat
gagttttctgatgttaacatcatagaaggattgtctagatga
DBGET
integrated database retrieval system
