Populus trichocarpa (black cottonwood): 7466041
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Entry
7466041 CDS
T01077
Name
(RefSeq) ataxin-3 homolog
KO
K11863
ataxin-3 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7466041
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7466041
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7466041
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C86
7466041
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
7466041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Josephin
UIM
DUF4902
UIM_2
Motif
Other DBs
NCBI-GeneID:
7466041
NCBI-ProteinID:
XP_002323552
UniProt:
B9IG41
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All DBs
Position
16:complement(11287817..11291124)
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AA seq
280 aa
AA seq
DB search
MEGESNGGMLYHEVQEAKLCAVHCVNTVLQGPFFSEFDLAALASDLDTKERQMMQEGTVS
AAASGDFLSAESHNVSLGGDFSIQVLQKALEVWDLQVIASDSPVAEHAQIDPDLENAFIC
HLHDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLAAYLDSLKNSGWSIFLVRGNFPKEFP
IASSEASNGYGQWLSPEDAERIIKSCNNTQSPQRINSTQQDSNPYQEILLEMEDQDMKAA
IAASLMEPSQSMSRVETGSPQKDDEDTKDDNKDSEDKKPQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagagcaatggagggatgttgtaccacgaggtacaagaggcaaagctatgc
gccgtacattgtgttaacacggtgttacaaggaccattcttttcagaattcgatttggcg
gcgcttgcatccgatctcgatacgaaagagcgccaaatgatgcaagagggcaccgtctcc
gccgctgcttctggtgattttctctccgccgagtctcataatgtctccttaggcggtgat
ttcagtatccaggttttacaaaaggctttagaggtgtgggacttgcaggtcattgcctct
gatagtccggttgctgagcatgcacagattgaccctgatctagaaaatgcatttatttgt
catttgcatgatcattggttctgcattaggaaagtgaatggggagtggtataactttgac
agcctctacgcagctccacaacacttatccaagttttaccttgcagcctatctggattct
cttaaaaactctggctggagcattttcctggtgagaggaaacttcccgaaagagtttccc
attgcttcctctgaagcttccaatggttatgggcagtggctgtctcctgaagatgctgag
aggattattaaatcctgcaacaacacgcagtctcctcagagaatcaattccactcaacag
gattctaatccatatcaagaaattctgttagaaatggaggaccaggacatgaaagctgca
atagctgccagcttgatggaaccttcccaatccatgagcagggtggaaactggcagtccc
caaaaagacgatgaagataccaaagatgacaacaaagatagcgaggacaaaaagcctcaa
taa
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