Populus trichocarpa (black cottonwood): 7467588
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Entry
7467588 CDS
T01077
Name
(RefSeq) phosphatidate phosphatase PAH1 isoform X1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00561
Glycerolipid metabolism
pop00564
Glycerophospholipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
7467588
00564 Glycerophospholipid metabolism
7467588
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7467588
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
7467588
Protein phosphatases and associated proteins [BR:
pop01009
]
HAD phosphatases
Other HAD phosphatases
7467588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
LNS2_PITM1-3
HAD_PNKP
APP1_cat
Motif
Other DBs
NCBI-GeneID:
7467588
NCBI-ProteinID:
XP_002323437
UniProt:
B9IIW4
LinkDB
All DBs
Position
16:complement(6249311..6257368)
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AA seq
898 aa
AA seq
DB search
MNVVGKVGSLISQGMYSVVTPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGA
EKIVRINVNGVEANFHMYLDNSGEAYFIKEVQPGKGSEANGVIKDSNSMTMSNEGVSVGF
SDVGDNNVVGISRLEHSVSDSRVIQLREEENSSGAAQLRRAESDGDRRYYDFQDEQASMD
DSVELSEYASDIYNGLDGEHPAVSQGSDSEVILVSVDGHVLTAPVLESEQNTESVQLCIP
QFHLGPGDDTEEFNLGDDAWAADYITKLNASVSNFSSDNAYSVNNGGNARQPEVSEGDRE
LLCQSQEIQDIPRSEGDLLVQSDSDASVRINREEVFKSCLALPELAKPGGIADPEETDTS
PEVQKDSHAESPCSPPAVDQTTNRDLVEFTDNGCNSDSSGLHGSPTVQVELKAAEKNASR
TEHIGADSTCTSVRIGNSSDEMGEESYHMSTVGEELDNSLQGPVPEDESSKSETVKPQIE
CEACSSKGFEISLCGKELHSGMGLESAAEVFVSHRISAEEFKNSETSIIRNENLIIRYRE
KYFTWEKAAPIVLGMAAFGLDLPAEPKDAIPVELDDILEQRDDDAGITSAPSSRRWRLWP
IPFRRVKTSSNSSSEELFVDSESGVQNSNVESTSASCGGSESPHKQFLRTNVPTSEQIAS
LNLKDGQNLITFSFSTRVLGTQQVDCHIYLWKWNARIVISDVDGTITRSDVLGQFMPLVG
KDWTQSGVAKLFCAIKENGYQLLFLSARAIVQAYLTRSFLFNLKQDGKTLPNGPVVISPD
GLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGK
IFIINPKGEVAISHRIDVKSYTSLHTLVNDMFPPTSSAEQEDYNSWNFWKVPLPEIEF
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgttgggaaagtaggtagtttaatttctcagggtatgtactcagttgtgacc
ccttttcatccttttggcggggctgtggatgtgattgtggtacaacagcaggatgggaca
tttcgaagtaccccatggtatgttcgatttggtaaatttcagggtgttcttaagggagca
gagaagattgtccgcataaatgtcaatggtgttgaagcgaattttcacatgtatcttgat
aattccggtgaagcttatttcataaaggaggttcagcctggtaaaggaagtgaggcaaat
ggggtgataaaggattctaatagcatgacaatgtcaaatgaaggtgtcagtgttggtttt
agtgatgtcggtgataataatgttgttggaatatctaggcttgagcatagtgtttccgat
tctagggtgattcagttgcgagaggaagagaattcatcaggtgcagcccaacttcgaagg
gcagaatctgatggtgaccggaggtattatgattttcaagatgagcaagcctctatggat
gattcagttgagttatcagagtatgcttctgatatatataatggtttagatggtgagcat
cctgctgtttcacaaggttcagattcagaagtgatcttggtgagtgtggatggtcatgtc
ctgacagcccctgtattggaatcagaacagaataccgagagtgtgcaattatgcatccct
cagttccatctgggcccaggtgatgacaccgaggagtttaatttaggtgatgatgcatgg
gctgctgattacatcactaagctgaatgcatccgtgtctaatttttcatctgataatgct
tacagtgtaaataatggtggtaatgctcgccaaccggaagtttctgaaggtgacagggag
cttttatgtcaaagtcaagaaattcaggacattcctaggtcagaaggagatcttctggtg
caaagtgattcagatgcatctgttaggataaatagggaagaggttttcaaaagctgcttg
gcgttaccggaattggccaaaccgggtggaattgctgatcctgaggaaacagatacttca
cctgaggtgcaaaaagattcacatgcggagtctccttgtagtcctccagcagttgatcaa
actactaatagagatcttgttgaattcacagataatggctgtaattctgattctagcggc
ctccatggatcacctactgtgcaggttgaactcaaagcagcagagaaaaatgcttcaagg
acagaacatataggtgctgacagcacatgtacttctgttagaattggtaacagttcagat
gagatgggtgaagagtcttatcacatgtccacagtaggtgaagagttggataatagcctg
caaggacctgttcctgaagatgagtccagtaaaagcgagactgtgaaaccacaaatagag
tgcgaagcttgttcaagcaaagggtttgagatctccctctgtggaaaggaactccattca
ggtatgggcttggagtctgctgctgaagtgtttgtatcacatcgcatatctgctgaggaa
tttaaaaactctgaaacatcaattatcaggaatgaaaatttaataatcagatacagagag
aagtacttcacgtgggaaaaggctgctcctattgtgcttggaatggctgcatttggtttg
gatttacctgctgagcccaaagatgcgattcctgtggagctggatgacatacttgagcaa
agggatgatgatgctgggattacttccgcaccatctagccgcagatggaggctttggcct
attccatttagaagggttaagacaagcagtaactcatcaagtgaagagttatttgttgat
tctgaatctggagtgcaaaactcaaatgttgaatcaacttcagcatcctgtggtggttct
gagtctcctcacaagcagtttttaaggacaaatgttccaactagtgagcagatagcatca
ttgaatctgaaagatggtcaaaatttgataacattcagtttctctactagggttctaggt
acacaacaggttgattgtcatatctacttatggaagtggaatgcaaggatagtgatttca
gatgtggatggaacaattaccaggtctgatgttttgggtcaattcatgcccctggttgga
aaggattggacacaatctggagttgctaaacttttttgtgccattaaggagaatggatat
cagctattgtttctgagtgcacgtgcaattgttcaggcgtatctaaccagaagtttcctt
ttcaacctaaagcaggatggaaaaaccctaccaaatggacctgttgttatttcacctgat
ggattgtttccctcattgtaccgggaagtcataagaagagctcctcatgagttcaagatt
gcgtgcttagaggacattaaaagactctttccttctgattacaacccgttctatgcggga
ttcggaaatagagacaccgatgagcttagttacaggaaaattgggattccgaagggcaaa
atatttattataaacccaaagggtgaggtggccattagtcatcgcatcgatgtgaagtcc
tacacatcattacacacgctggtcaatgatatgttcccccctacatcgtcagctgagcag
gaagattataactcatggaatttttggaaggtgccattgcccgagattgagttctag
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