KEGG   Populus trichocarpa (black cottonwood): 7474873
Entry
7474873           CDS       T01077                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    7474873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7474873
Enzymes [BR:pop01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     7474873
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     7474873
 Prokaryotic type
     7474873
SSDB
Motif
Pfam: HhH-GPD KANSL3_1st
Other DBs
NCBI-GeneID: 7474873
NCBI-ProteinID: XP_002321564
LinkDB
Position
15:9689517..9693482
AA seq 309 aa
MQTGHKRKQQHELKPRTNKKSAETISNIKEEEPFPTHARPTPEECRAIRDSLLAFHGFPQ
EFAKYRKQRPYLITLQDKEESPHLINNCDGKNDNVVKVEEEEEEEEEEEESALDGLVKTV
LSQNTTEVNSQRAFLNLKSAFPTWENVLAAESKFIEDAIRCGGLAPTKAACIRNILSSLM
EKKGRLCLEYLRDLPVAEIKAELSHFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKAI
GWVPPVADRNKTYLHLNHRIPKELKFDLNCLLYTHGKLCRKCTKKSGSQQRKETHDDSCP
LLNYCVKLS
NT seq 930 nt   +upstreamnt  +downstreamnt
atgcagaccggacacaaaagaaagcaacagcatgagcttaaacctcgaaccaacaaaaaa
tcagccgaaaccataagcaacattaaagaagaagagccatttccaactcacgctcgacct
acacctgaagaatgtagagccatacgagactctctcttggccttccacggctttcctcaa
gagtttgcaaagtatcgcaaacagagaccctatttaataactctacaagacaaagaagag
tccccccacttaatcaacaattgcgatggaaagaatgacaatgtggtgaaagtggaagaa
gaagaagaagaagaagaagaagaagaagaaagtgctttggatggtttagtgaaaacagtg
ctatcccagaatactacagaggttaattctcaaagggcttttcttaatctcaagtctgcc
tttccaacttgggaaaatgtacttgctgctgaatcaaaatttatagaggatgccataaga
tgtggaggtttagctccaacaaaggctgcttgcattaggaacatattgagttctttgatg
gagaaaaaaggaagattatgcttggagtaccttcgagatttgccagttgctgaaattaag
gctgagctctctcatttcaaaggaattggacccaagacagtagcttgtgttttgatgttc
aaccttcagaaggatgatttcccagtggacacgcatgtgtttgaaattgcaaaggccatt
ggttgggtaccaccagtggcagaccgcaataagacatatcttcacctcaatcatcgcata
ccaaaggaactaaaatttgatctgaattgtcttctatatacacacggtaagctttgccgt
aaatgcactaagaaaagtggcagccagcaaagaaaggaaacccatgatgattcctgtcct
ctactaaattattgtgtaaaattatcatga

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